DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-2 and Khdrbs3

DIOPT Version :9

Sequence 1:NP_001286724.1 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_071585.2 Gene:Khdrbs3 / 64015 RGDID:620921 Length:346 Species:Rattus norvegicus


Alignment Length:303 Identity:118/303 - (38%)
Similarity:164/303 - (54%) Gaps:43/303 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 QKYMQELMTERSRMENHFPLAVKLIDEALERVQLNGRIPTRDQYADVYQQRTIKLSQKVHVPIKD 138
            :||:.|||.|:..::..|..|::|::..:|:.| .|.....::|.||...:.:||.|||.:|:|.
  Rat     3 EKYLPELMAEKDSLDPSFTHALRLVNREIEKFQ-KGEAKDEEKYIDVVINKNMKLGQKVLIPVKQ 66

  Fly   139 -KKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHVEV 202
             .|||:|||||||:||||:||||||..|:.|||:.||:|:|:|||||.|.:|||.|||..|||.:
  Rat    67 FPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLI 131

  Fly   203 STIAPPAEAYARVAYALAEIRRYLTPDKHDDIRQEQYREL---------MEDPEAAKKLTLRQLQ 258
            ...|||||||||:.:||.||:::|.||.:|:|||.|.:||         .:.|....|.|||...
  Rat   132 EVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSENADVPVVRGKSTLRTRG 196

  Fly   259 QQSNAAASGAGG--------GGGGGGGNGNGGAAGSGS-NNGNG--NQRSGG----NYR------ 302
            ..:.|...|.||        |...|.....|..:..|. :.|.|  ..|:.|    .||      
  Rat   197 VTTPAITRGRGGVTARPVAVGVPRGTPTPRGVLSTRGPVSRGRGLLTPRARGVPPTGYRPPPPPP 261

  Fly   303 -QKFQQQSHYRHNEETVY----FRSHNNAYHQPKPYVPAAQRG 340
             |:...:..|.....|.|    :.|::|:|..|      ||.|
  Rat   262 TQETYGEYDYDDGYSTAYDDQSYDSYDNSYSTP------AQSG 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-2NP_001286724.1 SF1_like-KH 129..244 CDD:239088 71/124 (57%)
Khdrbs3NP_071585.2 Involved in homodimerization. /evidence=ECO:0000250|UniProtKB:O75525 1..160 81/157 (52%)
Qua1 4..53 CDD:406639 15/49 (31%)
KH-I_KHDRBS3 48..160 CDD:411898 67/111 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..268 11/55 (20%)
Sam68-YY 266..320 CDD:406871 10/39 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..346
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348925
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8931
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.810

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