DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-2 and khdrbs1b

DIOPT Version :10

Sequence 1:NP_523810.2 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_998400.1 Gene:khdrbs1b / 406516 ZFINID:ZDB-GENE-040426-2344 Length:352 Species:Danio rerio


Alignment Length:302 Identity:99/302 - (32%)
Similarity:157/302 - (51%) Gaps:58/302 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KYMQELMTERSRMENHFPLAVKLIDEALERVQLNGRIPTRDQYADVYQQRTIKLSQKVHVPIKD- 138
            ||:.:|:.||..::..|..|:|||...:|:::........:.|.|::..:.|||.:::.:|:|. 
Zfish     6 KYLPQLLAERDSLDPSFTHAMKLISAEIEKIEKGDTEKDTESYLDLFTMKNIKLKERILIPVKQY 70

  Fly   139 KKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHVEVS 203
            .|||:|||:|||:||:::||||||..||.:||:.||:|:.:|||||.:.:.|||||::.|||.:.
Zfish    71 PKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKNKEEELRKNGEPKYAHLSMELHVFIE 135

  Fly   204 TIAPPAEAYARVAYALAEIRRYLTPDKHDDIRQEQYRELMEDPEAAKKLTLRQLQQQSNAAASGA 268
            ..||..:||.|:|:|:.||:::|.||..|||.|||:.|            ::.|.........|.
Zfish   136 VFAPVPDAYMRMAHAMEEIKKFLFPDMMDDICQEQFME------------MKFLNGGQEHGGRGR 188

  Fly   269 GG----------------------GGGGGGGNGNGGAAGSGSNNGNGN-----QRSGGNYRQK-- 304
            ||                      .|||.||...|||| .|:..|.|.     .|...:.|.:  
Zfish   189 GGPPIRGRGGLPPPGAPRGRGMPPRGGGRGGPPRGGAA-RGAPAGRGGPSAQLPRGAASNRARPP 252

  Fly   305 -----------FQQQSHYRHNEETVY----FRSHNNAYHQPK 331
                       ..|:|:..::.:..|    :.|:::.|.||:
Zfish   253 APGAPRMPPPPQTQESYDEYSYDESYADTGYESYDSYYSQPQ 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-2NP_523810.2 KH-I_KHDRBS 124..224 CDD:411812 51/100 (51%)
khdrbs1bNP_998400.1 Qua1 6..56 CDD:465079 13/49 (27%)
KH-I_KHDRBS1 55..160 CDD:411896 52/104 (50%)
Sam68-YY 269..318 CDD:465182 5/26 (19%)

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