DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-2 and khdrbs1a

DIOPT Version :9

Sequence 1:NP_001286724.1 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_571000.1 Gene:khdrbs1a / 30082 ZFINID:ZDB-GENE-000210-25 Length:370 Species:Danio rerio


Alignment Length:405 Identity:116/405 - (28%)
Similarity:177/405 - (43%) Gaps:85/405 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 HENEHNANA-DGEKAQPAPAVQKYMQELMTERSRMENHFPLAVKLIDEALERVQLNGRIPTRDQ- 116
            :.|:...|| ||          ||:.||:.|:..:::.|..|:||:...:|||| .|. |.:|. 
Zfish     4 NSNKRKNNAGDG----------KYLPELLAEKDSLDSSFTHAMKLLSAEIERVQ-KGE-PKKDSE 56

  Fly   117 -YADVYQQRTIKLSQKVHVPIKD-KKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAR 179
             |.|::..:::::.::|.:|:|. .:||:|||:|||:|::::||||:|..||.:||:.||:|:.:
Zfish    57 LYLDLFASKSVRVKERVLIPVKQYPRFNFVGKILGPQGSTIKRLQEDTGAKISVLGKGSMRDKNK 121

  Fly   180 EEELRNSADAKYAHLNLPLHVEVSTIAPPAEAYARVAYALAEIRRYLTPDKHDDIRQEQYRELME 244
            |||||...|.|||||.:.|||.:...||..:.|.|:|:|:.|::::|.|.:..|   |.:.:...
Zfish   122 EEELRKGGDPKYAHLGMELHVHIEVFAPIPDCYLRMAHAMDEVKKFLMPVEGMD---EMHPDAFM 183

  Fly   245 DPEAAKKLTLRQLQQQSNAAASGAGGGGGGG---GGNGNG------------------GAAGSGS 288
            ||.     .|...|..|.......|.|.||.   |..|.|                  |||..|:
Zfish   184 DPG-----FLNGAQDMSGHGRGMPGRGRGGPPPMGARGRGMPPRGAPRGGAPRGGPGRGAAARGA 243

  Fly   289 NNGNGN------QRSGGNYRQKFQQQ----------SHYRHNEETVYFRSHNNAYHQPKPYVPAA 337
            ..|.|.      .|.|...|.:...|          ||.:...||.      ..|...:||..|:
Zfish   244 PAGRGGPQPPTPTRGGAASRSRPPTQAARMTPAAGLSHQQAKPETY------GEYAYEEPYAEAS 302

  Fly   338 QRG-NAMHTTLPPQAIVRASPPGMVVSAASFNGRNAGLGNAGGGGIMANSIVATTGGGIGGAVP- 400
            ..| .:.::..|.|........|...:..|:..........|            ..||.||..| 
Zfish   303 YEGYESYYSQQPAQPDTEYYDYGHGEAQESYESYTEDDWEGG------------AWGGAGGKAPT 355

  Fly   401 ----PNMRYRPAAPY 411
                .:.|..|...|
Zfish   356 ARQGKSFREHPYGRY 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-2NP_001286724.1 SF1_like-KH 129..244 CDD:239088 49/115 (43%)
khdrbs1aNP_571000.1 Qua1 17..65 CDD:292891 17/49 (35%)
SF1_like-KH 70..190 CDD:239088 52/127 (41%)
Sam68-YY 289..340 CDD:293176 9/56 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590125
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_158457
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.710

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