DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-2 and Khdrbs1

DIOPT Version :9

Sequence 1:NP_001286724.1 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_035447.3 Gene:Khdrbs1 / 20218 MGIID:893579 Length:443 Species:Mus musculus


Alignment Length:388 Identity:115/388 - (29%)
Similarity:173/388 - (44%) Gaps:121/388 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GGGSAAGTAGAGTGVVPTGVSGGTSNGEHENEHNANADGEKAQPAPAV-------------QKYM 77
            |||...|.|.|.....|..:...::.|.     :|...|  :.|.|.:             .||:
Mouse    47 GGGGPRGGARASPATQPPPLLPPSTPGP-----DATVVG--SAPTPLLPPSATAAVKMEPENKYL 104

  Fly    78 QELMTERSRMENHFPLAVKLIDEALERVQLNGRIPTRDQ--YADVYQQRTIKLSQKVHVPIKD-K 139
            .|||.|:..::..|..|::|:...:|::| .|.....|:  |.|::..:.:||.::|.:|:|. .
Mouse   105 PELMAEKDSLDPSFTHAMQLLSVEIEKIQ-KGESKKDDEENYLDLFSHKNMKLKERVLIPVKQYP 168

  Fly   140 KFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHVEVST 204
            |||:|||:|||:||:::||||||..||.:||:.||:|:|:|||||...|.||||||:.|||.:..
Mouse   169 KFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEV 233

  Fly   205 IAPPAEAYARVAYALAEIRRYLTPDKHDDIRQEQYREL-----MEDPEAAKKLTLRQLQQQSNAA 264
            ..||.||||.:|:|:.|::::|.||..|||.|||:.||     :.:|...:.:::|         
Mouse   234 FGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPEPSRGRGVSVR--------- 289

  Fly   265 ASGAGGGGGGGGGNGNGGAAGSGSNNGNGNQRSGGNYRQKFQQQSHYRHNEETVYFRSHNNAYHQ 329
                          |.|.|                                             .
Mouse   290 --------------GRGAA---------------------------------------------P 295

  Fly   330 PKPYVPAAQRGNAMHTTLPPQ-AIVRAS-----------------PPGMVVSAASFNGRNAGL 374
            |.|.||   ||..:.   ||: |:||.:                 ||..|..|.:...|.||:
Mouse   296 PPPPVP---RGRGVG---PPRGALVRGTPVRGSITRGATVTRGVPPPPTVRGAPTPRARTAGI 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-2NP_001286724.1 SF1_like-KH 129..244 CDD:239088 63/120 (53%)
Khdrbs1NP_035447.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94 12/53 (23%)
Involved in homodimerization. /evidence=ECO:0000250|UniProtKB:Q07666 100..260 72/160 (45%)
Qua1 103..153 CDD:318503 14/50 (28%)
SF1_like-KH 157..276 CDD:239088 63/118 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..317 16/110 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..345 4/18 (22%)
Interaction with HNRNPA1. /evidence=ECO:0000250|UniProtKB:Q07666 351..443 1/2 (50%)
Sam68-YY 366..415 CDD:318716
Interaction with ZBTB7A. /evidence=ECO:0000250|UniProtKB:Q07666 400..420
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 411..443
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845530
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8696
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.810

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