DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-1 and Khdrbs3

DIOPT Version :9

Sequence 1:NP_523809.2 Gene:qkr58E-1 / 37561 FlyBaseID:FBgn0022986 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_071585.2 Gene:Khdrbs3 / 64015 RGDID:620921 Length:346 Species:Rattus norvegicus


Alignment Length:380 Identity:130/380 - (34%)
Similarity:184/380 - (48%) Gaps:78/380 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LNEKTNAYLQECLLEKKTLEKKHIITKRLLDDEVEKILVSGRIPKPEIYANVYSEKPIRVAQKVL 118
            :.||   ||.|.:.||.:|:.......||::.|:|| ...|.....|.|.:|...|.:::.||||
  Rat     1 MEEK---YLPELMAEKDSLDPSFTHALRLVNREIEK-FQKGEAKDEEKYIDVVINKNMKLGQKVL 61

  Fly   119 FPIKEYPKFNFVGKILGPKGNTLRQLQEETMCKMVVMGRNSMRDHGKEEELRSSGNPKYAHLSRD 183
            .|:|::||||||||:|||:||:|::|||||:.||.::|:.||||..||||||.||..||.||:.|
  Rat    62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDD 126

  Fly   184 LHVEISTVAPPAEAYHRISYALGEIRKFMIPDANDDIRLEQLREMD---------------GKER 233
            |||.|...|||||||.|:.:||.||:||:|||.||:||..||:|:.               ||..
  Rat   127 LHVLIEVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSENADVPVVRGKST 191

  Fly   234 MYKKSHHYSKSYGDHGAYSSR---------TPPP---ASSKPKVYSILEKARYVMDDPNYGIVKT 286
            :..:...........|..::|         ||.|   .|::..|    .:.|.::.....|:..|
  Rat   192 LRTRGVTTPAITRGRGGVTARPVAVGVPRGTPTPRGVLSTRGPV----SRGRGLLTPRARGVPPT 252

  Fly   287 HRSRDHELYDHHGEYDRYATPPPQTSKHSTHHAQYDSSSYERDYRREYHPHSSSS---SYAAAYP 348
                            .|..|||..::.:  :.:||   |:..|...|...|..|   ||:.  |
  Rat   253 ----------------GYRPPPPPPTQET--YGEYD---YDDGYSTAYDDQSYDSYDNSYST--P 294

  Fly   349 AKPSNGRSSSSYRPTTSGSGSH-----------SSAHYETGSRSRESVRYRSAPY 392
            |     :|.:.|.....|.|..           :|.|....:|:.:.| ||..||
  Rat   295 A-----QSGADYYDYGHGLGEEAYDSYGQEDWTNSRHKAPSARTAKGV-YREQPY 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-1NP_523809.2 KH-I 109..210 CDD:412160 62/100 (62%)
Khdrbs3NP_071585.2 Involved in homodimerization. /evidence=ECO:0000250|UniProtKB:O75525 1..160 84/162 (52%)
Qua1 4..53 CDD:406639 16/52 (31%)
KH-I_KHDRBS3 48..160 CDD:411898 68/111 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..268 13/77 (17%)
Sam68-YY 266..320 CDD:406871 15/63 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..346 8/25 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348920
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4780
Inparanoid 1 1.050 168 1.000 Inparanoid score I4063
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8931
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.860

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