DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-1 and khdrbs1b

DIOPT Version :10

Sequence 1:NP_523809.2 Gene:qkr58E-1 / 37561 FlyBaseID:FBgn0022986 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_998400.1 Gene:khdrbs1b / 406516 ZFINID:ZDB-GENE-040426-2344 Length:352 Species:Danio rerio


Alignment Length:381 Identity:118/381 - (30%)
Similarity:167/381 - (43%) Gaps:91/381 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 EKTNAYLQECLLEKKTLEKKHIITKRLLDDEVEKILVSGRIPKPEIYANVYSEKPIRVAQKVLFP 120
            |..|.||.:.|.|:.:|:.......:|:..|:|||.........|.|.::::.|.|::.:::|.|
Zfish     2 ESENKYLPQLLAERDSLDPSFTHAMKLISAEIEKIEKGDTEKDTESYLDLFTMKNIKLKERILIP 66

  Fly   121 IKEYPKFNFVGKILGPKGNTLRQLQEETMCKMVVMGRNSMRDHGKEEELRSSGNPKYAHLSRDLH 185
            :|:|||||||||||||:|||:::|||||..|:.|:|:.||||..||||||.:|.|||||||.:||
Zfish    67 VKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKNKEEELRKNGEPKYAHLSMELH 131

  Fly   186 VEISTVAPPAEAYHRISYALGEIRKFMIPDANDDIRLEQLREM----DGKERMYKKSHHYSKSYG 246
            |.|...||..:||.|:::|:.||:||:.||..|||..||..||    .|:|       |..:..|
Zfish   132 VFIEVFAPVPDAYMRMAHAMEEIKKFLFPDMMDDICQEQFMEMKFLNGGQE-------HGGRGRG 189

  Fly   247 ---------------------------------------------------DHGAYSSRTPPPAS 260
                                                               ..||.|:|..|||.
Zfish   190 GPPIRGRGGLPPPGAPRGRGMPPRGGGRGGPPRGGAARGAPAGRGGPSAQLPRGAASNRARPPAP 254

  Fly   261 SKPKVYSILEKARYVMDDPNYGIVKTHRSRDHELYDH------HGEYDRYATPPPQTSKHSTHHA 319
            ..|:           |..|    .:|..|.|...||.      :..||.|.:.|...   .|.:.
Zfish   255 GAPR-----------MPPP----PQTQESYDEYSYDESYADTGYESYDSYYSQPQAA---ETEYY 301

  Fly   320 QYDSSSYERDYRREYHPHSSSSSYAAAYPAKPSNGRSSSSYRPTTSGSGSHSSAHY 375
            .|.....:..|......:.:.:...||     :.|..:.:.|.|..|...|....|
Zfish   302 DYGHGETQEGYENYAQDNWNGTPRTAA-----AAGGKAPTQRQTKPGFREHPYGRY 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-1NP_523809.2 KH-I_KHDRBS 109..210 CDD:411812 59/100 (59%)
khdrbs1bNP_998400.1 Qua1 6..56 CDD:465079 12/49 (24%)
KH-I_KHDRBS1 55..160 CDD:411896 61/104 (59%)
Sam68-YY 269..318 CDD:465182 10/51 (20%)

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