DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-1 and khdrbs1a

DIOPT Version :9

Sequence 1:NP_523809.2 Gene:qkr58E-1 / 37561 FlyBaseID:FBgn0022986 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_571000.1 Gene:khdrbs1a / 30082 ZFINID:ZDB-GENE-000210-25 Length:370 Species:Danio rerio


Alignment Length:415 Identity:117/415 - (28%)
Similarity:180/415 - (43%) Gaps:124/415 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PQLNEKTN-----AYLQECLLEKKTLEKKHIITKRLLDDEVEKILVSGRIPKPEIYANVYSEKPI 111
            |..|::.|     .||.|.|.||.:|:.......:||..|:|::.........|:|.::::.|.:
Zfish     3 PNSNKRKNNAGDGKYLPELLAEKDSLDSSFTHAMKLLSAEIERVQKGEPKKDSELYLDLFASKSV 67

  Fly   112 RVAQKVLFPIKEYPKFNFVGKILGPKGNTLRQLQEETMCKMVVMGRNSMRDHGKEEELRSSGNPK 176
            ||.::||.|:|:||:||||||||||:|:|:::|||:|..|:.|:|:.||||..||||||..|:||
Zfish    68 RVKERVLIPVKQYPRFNFVGKILGPQGSTIKRLQEDTGAKISVLGKGSMRDKNKEEELRKGGDPK 132

  Fly   177 YAHLSRDLHVEISTVAPPAEAYHRISYALGEIRKFMIP-DANDDIR---------LEQLREMDGK 231
            ||||..:|||.|...||..:.|.|:::|:.|::||::| :..|::.         |...::|.|.
Zfish   133 YAHLGMELHVHIEVFAPIPDCYLRMAHAMDEVKKFLMPVEGMDEMHPDAFMDPGFLNGAQDMSGH 197

  Fly   232 ER-MYKKSHHYSKSYG------------------------------------------DHGAYSS 253
            .| |..:........|                                          ..|..:|
Zfish   198 GRGMPGRGRGGPPPMGARGRGMPPRGAPRGGAPRGGPGRGAAARGAPAGRGGPQPPTPTRGGAAS 262

  Fly   254 RTPPPASSKPKVYSILEKARYVMDDPNYGIVKTHRSRDHELYDHHGEYDRYATPPPQTSKHSTHH 318
            |:.||.          :.||..   |..|:  :|:....|.|   ||| .|..|           
Zfish   263 RSRPPT----------QAARMT---PAAGL--SHQQAKPETY---GEY-AYEEP----------- 297

  Fly   319 AQYDSSSYERDYRREYHPHSSSSSYAAAYPAKP-------SNGRSSSSYRPTTSGSGSHSSAHYE 376
              |..:|||           ...||.:..||:|       .:|.:..||.       |::...:|
Zfish   298 --YAEASYE-----------GYESYYSQQPAQPDTEYYDYGHGEAQESYE-------SYTEDDWE 342

  Fly   377 TGS---------RSRESVRYRSAPY 392
            .|:         .:|:...:|..||
Zfish   343 GGAWGGAGGKAPTARQGKSFREHPY 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-1NP_523809.2 KH-I 109..210 CDD:412160 55/100 (55%)
khdrbs1aNP_571000.1 Qua1 17..65 CDD:292891 13/47 (28%)
SF1_like-KH 70..190 CDD:239088 57/119 (48%)
Sam68-YY 289..340 CDD:293176 19/85 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590115
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 190 1.000 Inparanoid score I3866
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.860

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