DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-1 and khdrbs1a

DIOPT Version :10

Sequence 1:NP_523809.2 Gene:qkr58E-1 / 37561 FlyBaseID:FBgn0022986 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_571000.1 Gene:khdrbs1a / 30082 ZFINID:ZDB-GENE-000210-25 Length:370 Species:Danio rerio


Alignment Length:415 Identity:117/415 - (28%)
Similarity:180/415 - (43%) Gaps:124/415 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PQLNEKTN-----AYLQECLLEKKTLEKKHIITKRLLDDEVEKILVSGRIPKPEIYANVYSEKPI 111
            |..|::.|     .||.|.|.||.:|:.......:||..|:|::.........|:|.::::.|.:
Zfish     3 PNSNKRKNNAGDGKYLPELLAEKDSLDSSFTHAMKLLSAEIERVQKGEPKKDSELYLDLFASKSV 67

  Fly   112 RVAQKVLFPIKEYPKFNFVGKILGPKGNTLRQLQEETMCKMVVMGRNSMRDHGKEEELRSSGNPK 176
            ||.::||.|:|:||:||||||||||:|:|:::|||:|..|:.|:|:.||||..||||||..|:||
Zfish    68 RVKERVLIPVKQYPRFNFVGKILGPQGSTIKRLQEDTGAKISVLGKGSMRDKNKEEELRKGGDPK 132

  Fly   177 YAHLSRDLHVEISTVAPPAEAYHRISYALGEIRKFMIP-DANDDIR---------LEQLREMDGK 231
            ||||..:|||.|...||..:.|.|:::|:.|::||::| :..|::.         |...::|.|.
Zfish   133 YAHLGMELHVHIEVFAPIPDCYLRMAHAMDEVKKFLMPVEGMDEMHPDAFMDPGFLNGAQDMSGH 197

  Fly   232 ER-MYKKSHHYSKSYG------------------------------------------DHGAYSS 253
            .| |..:........|                                          ..|..:|
Zfish   198 GRGMPGRGRGGPPPMGARGRGMPPRGAPRGGAPRGGPGRGAAARGAPAGRGGPQPPTPTRGGAAS 262

  Fly   254 RTPPPASSKPKVYSILEKARYVMDDPNYGIVKTHRSRDHELYDHHGEYDRYATPPPQTSKHSTHH 318
            |:.||.          :.||..   |..|:  :|:....|.|   ||| .|..|           
Zfish   263 RSRPPT----------QAARMT---PAAGL--SHQQAKPETY---GEY-AYEEP----------- 297

  Fly   319 AQYDSSSYERDYRREYHPHSSSSSYAAAYPAKP-------SNGRSSSSYRPTTSGSGSHSSAHYE 376
              |..:|||           ...||.:..||:|       .:|.:..||.       |::...:|
Zfish   298 --YAEASYE-----------GYESYYSQQPAQPDTEYYDYGHGEAQESYE-------SYTEDDWE 342

  Fly   377 TGS---------RSRESVRYRSAPY 392
            .|:         .:|:...:|..||
Zfish   343 GGAWGGAGGKAPTARQGKSFREHPY 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-1NP_523809.2 KH-I_KHDRBS 109..210 CDD:411812 55/100 (55%)
khdrbs1aNP_571000.1 Qua1 16..65 CDD:465079 13/48 (27%)
KH-I 65..170 CDD:469614 57/104 (55%)
Sam68-YY 289..340 CDD:465182 19/85 (22%)

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