DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-1 and Khdrbs1

DIOPT Version :9

Sequence 1:NP_523809.2 Gene:qkr58E-1 / 37561 FlyBaseID:FBgn0022986 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_035447.3 Gene:Khdrbs1 / 20218 MGIID:893579 Length:443 Species:Mus musculus


Alignment Length:393 Identity:134/393 - (34%)
Similarity:185/393 - (47%) Gaps:73/393 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EPAATGAPETPEAD----GGGHT-----TSHAALRDTPQLNEKTNAYLQECLLEKKTLEKKHIIT 79
            :|.....|.||..|    |...|     ::.||::..|:     |.||.|.:.||.:|:......
Mouse    62 QPPPLLPPSTPGPDATVVGSAPTPLLPPSATAAVKMEPE-----NKYLPELMAEKDSLDPSFTHA 121

  Fly    80 KRLLDDEVEKILVSGRIPK--PEIYANVYSEKPIRVAQKVLFPIKEYPKFNFVGKILGPKGNTLR 142
            .:||..|:||| ..|...|  .|.|.:::|.|.:::.::||.|:|:|||||||||||||:|||::
Mouse   122 MQLLSVEIEKI-QKGESKKDDEENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIK 185

  Fly   143 QLQEETMCKMVVMGRNSMRDHGKEEELRSSGNPKYAHLSRDLHVEISTVAPPAEAYHRISYALGE 207
            :|||||..|:.|:|:.||||..||||||..|:||||||:.||||.|....||.|||..:::|:.|
Mouse   186 RLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEE 250

  Fly   208 IRKFMIPDANDDIRLEQLREMDGKERMYKKSHHYSKSYGDHGAYSSRTPPP-------------- 258
            ::||::||..|||..||..|:.....:.:.|.....|....||  :..|||              
Mouse   251 VKKFLVPDMMDDICQEQFLELSYLNGVPEPSRGRGVSVRGRGA--APPPPPVPRGRGVGPPRGAL 313

  Fly   259 ASSKPKVYSILEKA---RYVMDDPNYGIVKTHRSRD-------------HELYDHHGEYDRYATP 307
            ....|...||...|   |.|...|......|.|:|.             .|.|:.:|..|.||  
Mouse   314 VRGTPVRGSITRGATVTRGVPPPPTVRGAPTPRARTAGIQRIPLPPTPAPETYEDYGYDDTYA-- 376

  Fly   308 PPQTSKHSTHHAQYDSSSYERDYRREYHPHSSSSSYAA--------------AYPAKPSNGRSSS 358
               ...:..:...|..|..|.:| .:|.......||.|              |.||:|..|    
Mouse   377 ---EQSYEGYEGYYSQSQGESEY-YDYGHGELQDSYEAYGQDDWNGTRPSLKAPPARPVKG---- 433

  Fly   359 SYR 361
            :||
Mouse   434 AYR 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-1NP_523809.2 KH-I 109..210 CDD:412160 58/100 (58%)
Khdrbs1NP_035447.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94 7/31 (23%)
Involved in homodimerization. /evidence=ECO:0000250|UniProtKB:Q07666 100..260 80/165 (48%)
Qua1 103..153 CDD:318503 17/50 (34%)
SF1_like-KH 157..276 CDD:239088 67/118 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..317 7/38 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..345 4/18 (22%)
Interaction with HNRNPA1. /evidence=ECO:0000250|UniProtKB:Q07666 351..443 21/96 (22%)
Sam68-YY 366..415 CDD:318716 13/54 (24%)
Interaction with ZBTB7A. /evidence=ECO:0000250|UniProtKB:Q07666 400..420 3/19 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 411..443 7/30 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845525
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 186 1.000 Inparanoid score I3911
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8696
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.860

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