DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-1 and Khdrbs3

DIOPT Version :9

Sequence 1:NP_523809.2 Gene:qkr58E-1 / 37561 FlyBaseID:FBgn0022986 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_034288.2 Gene:Khdrbs3 / 13992 MGIID:1313312 Length:346 Species:Mus musculus


Alignment Length:378 Identity:130/378 - (34%)
Similarity:187/378 - (49%) Gaps:74/378 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LNEKTNAYLQECLLEKKTLEKKHIITKRLLDDEVEKILVSGRIPKPEIYANVYSEKPIRVAQKVL 118
            :.||   ||.|.:.||.:|:.......||::.|:|| ...|...:.|.|.:|...|.:::.||||
Mouse     1 MEEK---YLPELMAEKDSLDPSFTHALRLVNREIEK-FQKGEGKEEEKYIDVVINKNMKLGQKVL 61

  Fly   119 FPIKEYPKFNFVGKILGPKGNTLRQLQEETMCKMVVMGRNSMRDHGKEEELRSSGNPKYAHLSRD 183
            .|:|::||||||||:|||:||:|::|||||:.||.::|:.||||..||||||.||..||.||:.|
Mouse    62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDD 126

  Fly   184 LHVEISTVAPPAEAYHRISYALGEIRKFMIPDANDDIRLEQLREMD---------------GKER 233
            |||.|...|||||||.|:.:||.||:||:|||.||:||..||:|:.               ||..
Mouse   127 LHVLIEVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSENADVPVVRGKST 191

  Fly   234 MYKKSHHYSKSYGDHGAYSSR---------TPPP---ASSKPKVYSILEKARYVMDDPNYGIVKT 286
            :..:...........|..::|         ||.|   .|::..|    .:.|.::.....|:..|
Mouse   192 LRTRGVTTPAITRGRGGVTARPVAVGVPRGTPTPRGVLSTRGPV----SRGRGLLTPRARGVPPT 252

  Fly   287 HRSRDHELYDHHGEYDRYATPPPQTSKHSTHHAQYDSSSYERDYRREYHPHSSSSSYAAAY--PA 349
                            .|..|||..::.:  :.:||   |:..|...| ...|..||..:|  ||
Mouse   253 ----------------GYRPPPPPPTQET--YGEYD---YDDGYGTAY-DEQSYDSYDNSYSTPA 295

  Fly   350 KPS-------NGRSSSSYRPTTSGSGSH---SSAHYETGSRSRESVRYRSAPY 392
            :.:       :|.|..:|    ...|..   :|.|....:|:.:.| ||..||
Mouse   296 QSAADYYDYGHGLSEDAY----DSYGQEEWTNSRHKAPSARTAKGV-YRDQPY 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-1NP_523809.2 KH-I 109..210 CDD:412160 62/100 (62%)
Khdrbs3NP_034288.2 Involved in homodimerization. /evidence=ECO:0000250|UniProtKB:O75525 1..160 84/162 (52%)
Qua1 5..53 CDD:292891 15/48 (31%)
SF1_like-KH 58..177 CDD:239088 73/118 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..266 13/75 (17%)
Sam68-YY 266..320 CDD:293176 15/61 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..346 9/28 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845509
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4780
Inparanoid 1 1.050 186 1.000 Inparanoid score I3911
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8696
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.860

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