DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qkr58E-1 and KHDRBS3

DIOPT Version :10

Sequence 1:NP_523809.2 Gene:qkr58E-1 / 37561 FlyBaseID:FBgn0022986 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_006549.1 Gene:KHDRBS3 / 10656 HGNCID:18117 Length:346 Species:Homo sapiens


Alignment Length:82 Identity:24/82 - (29%)
Similarity:31/82 - (37%) Gaps:22/82 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 GRVIKQVRT----YILRCYACFKTTPD------ATKVFCPKCGNRTLKKVSVSLDGEGKQIIH-- 334
            |||||.:..    ...||..|.:...|      |.:..|..|.||...:      |.||.|..  
Human   117 GRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKAR------GLGKYICQKC 175

  Fly   335 --INNRRPLTAKYKNRP 349
              |.:.:||.  :||.|
Human   176 HAIIDEQPLI--FKNDP 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-1NP_523809.2 KH-I_KHDRBS 109..210 CDD:411812
KHDRBS3NP_006549.1 Involved in homodimerization. /evidence=ECO:0000269|PubMed:26758068 1..160 12/42 (29%)
Qua1 4..53 CDD:465079
KH-I_KHDRBS3 48..160 CDD:411898 12/42 (29%)
Interaction with SIAH1. /evidence=ECO:0000269|PubMed:15163637 212..251
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..267
Sam68-YY 266..320 CDD:465182
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..346
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.