DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-1 and khdrbs3

DIOPT Version :9

Sequence 1:NP_523809.2 Gene:qkr58E-1 / 37561 FlyBaseID:FBgn0022986 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_009296555.1 Gene:khdrbs3 / 101867535 ZFINID:ZDB-GENE-130530-892 Length:305 Species:Danio rerio


Alignment Length:346 Identity:111/346 - (32%)
Similarity:158/346 - (45%) Gaps:93/346 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 ILVSGRIPKPEIYANVYSEKPIRVAQKVLFPIKEYPKFNFVGKILGPKGNTLRQLQEETMCKMVV 154
            :|:.|.|.:....|| .||             ::..:||||||:|||:||:|::|||:|:.||.:
Zfish    11 LLIVGLISRSGFSAN-KSE-------------QQQTQFNFVGKLLGPRGNSLKRLQEDTLTKMSI 61

  Fly   155 MGRNSMRDHGKEEELRSSGNPKYAHLSRDLHVEISTVAPPAEAYHRISYALGEIRKFMIPDANDD 219
            :|:.||||..||||||.||..||.||:.||||.|...|||||||.|:.:||.||:||:|||.||:
Zfish    62 LGKGSMRDKEKEEELRKSGETKYHHLNEDLHVLIEVFAPPAEAYARMGHALEEIKKFLIPDYNDE 126

  Fly   220 IRLEQLREM--------DGKERMYK-KSHHYSKSYGDHGAYSSR--TPPPASSKPK--------- 264
            ||..||:|:        |.|....: |:....:.....|.:.:|  .|||.::.|:         
Zfish   127 IRQAQLQELTYLNGGSEDAKVPAARGKTTTRGRGTSAPGTHRTRGGVPPPQAAVPRGAAPRGAPP 191

  Fly   265 --------VYSILEKARYVMDDPNYGIVKTHRSRDHELYDHHGEY---DRYATPPPQTSKHSTHH 318
                    |.....:||.....|.|      |.....:.|.:|||   |.|.|            
Zfish   192 SRVPSSRGVAVSSRRARGAPPPPGY------RPPPAVVQDTYGEYEYDDGYGT------------ 238

  Fly   319 AQYDS---SSYERDYRR------EYHPHS-SSSSYAAAYPAKPSNGRSSSSYRPTTSGSGSHSSA 373
             .||.   .||:.:|..      :|:.:. |..||.:..|.:.:|.|:.:....|:.|.      
Zfish   239 -AYDDQGYDSYDNNYNNQAQNSDDYYEYGISGDSYDSYGPEEWTNNRNKAPPARTSKGV------ 296

  Fly   374 HYETGSRSRESVRYRSAPYPK 394
                         ||..||.:
Zfish   297 -------------YRDQPYSR 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-1NP_523809.2 KH-I 109..210 CDD:412160 52/100 (52%)
khdrbs3XP_009296555.1 SF1_like-KH 34..141 CDD:239088 64/106 (60%)
Sam68-YY 227..279 CDD:293176 16/64 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590090
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4780
Inparanoid 1 1.050 190 1.000 Inparanoid score I3866
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26159
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.000

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