DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mes4 and NF-YC6

DIOPT Version :9

Sequence 1:NP_001163253.1 Gene:Mes4 / 37560 FlyBaseID:FBgn0034726 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_199859.1 Gene:NF-YC6 / 835116 AraportID:AT5G50480 Length:202 Species:Arabidopsis thaliana


Alignment Length:114 Identity:41/114 - (35%)
Similarity:63/114 - (55%) Gaps:11/114 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DNPEAESTTEQLTEKPVTNGN---------KAPADNEAKMTQLPLARIRNIMKLDPDLHMANNEA 100
            ||.:...:..||  .|:.:.|         :....::.|..|||||||:.|||.|||:||.:.||
plant    15 DNHQQPPSYSQL--PPMASSNPQLRNYWIEQMETVSDFKNRQLPLARIKKIMKADPDVHMVSAEA 77

  Fly   101 VFIVAKAVELFIASLSRESYTYTAQSKKKTIQKRDVDMAISAVDSLLFL 149
            ..|.|||.|:||..|:..|:....::|:.|:||.|:..|:::..:..||
plant    78 PIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNAVASSFTYDFL 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mes4NP_001163253.1 CBFD_NFYB_HMF 78..140 CDD:366318 30/61 (49%)
NF-YC6NP_199859.1 HAP5 <39..>133 CDD:227533 35/88 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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