DRSC/TRiP Functional Genomics Resources

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Protein Alignment PolE4 and Pole4

DIOPT Version :10

Sequence 1:NP_611669.1 Gene:PolE4 / 37560 FlyBaseID:FBgn0034726 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001357224.1 Gene:Pole4 / 66979 MGIID:1914229 Length:172 Species:Mus musculus


Alignment Length:127 Identity:48/127 - (37%)
Similarity:76/127 - (59%) Gaps:12/127 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 AELAETEEPLEITEESPDNPEAESTTEQLTEKPVTNGNKAPADNEAKMTQLPLARIRNIMKLDPD 92
            |..|.:..|.|  ||:|....|.|..:..|..|          ...::::|||||::.::|.|||
Mouse     4 AAAAGSGTPRE--EEAPGGEAAASQAQAPTSAP----------GGVRLSRLPLARVKALVKADPD 56

  Fly    93 LHMANNEAVFIVAKAVELFIASLSRESYTYTAQSKKKTIQKRDVDMAISAVDSLLFLDGAMN 154
            :.:|..||:||:|:|.|||:.::::::|....|.|:||:|:||:|.||.|||...||:|..|
Mouse    57 VTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRDLDNAIEAVDEFAFLEGLFN 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolE4NP_611669.1 HFD_POLE4-like 75..153 CDD:467054 36/77 (47%)
Pole4NP_001357224.1 HFD_POLE4-like 39..117 CDD:467054 36/77 (47%)

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