DRSC/TRiP Functional Genomics Resources

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Protein Alignment PolE4 and Pole4

DIOPT Version :10

Sequence 1:NP_611669.1 Gene:PolE4 / 37560 FlyBaseID:FBgn0034726 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_063142354.1 Gene:Pole4 / 362385 RGDID:1307793 Length:127 Species:Rattus norvegicus


Alignment Length:124 Identity:48/124 - (38%)
Similarity:76/124 - (61%) Gaps:12/124 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 AELAETEEPLEITEESPDNPEAESTTEQLTEKPVTNGNKAPADNEAKMTQLPLARIRNIMKLDPD 92
            |..|.:..|.|  ||:|....|.|..:..|..|          ..|::::|||||::.::|.|||
  Rat     4 AATAGSGTPRE--EEAPGGEAAASQAQAPTNAP----------GGARLSRLPLARVKALVKADPD 56

  Fly    93 LHMANNEAVFIVAKAVELFIASLSRESYTYTAQSKKKTIQKRDVDMAISAVDSLLFLDG 151
            :.:|..||:||:|:|.|||:.::::::|....|.|:||:|:||:|.||.|||...||:|
  Rat    57 VTLAGQEAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRDLDNAIEAVDEFAFLEG 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolE4NP_611669.1 HFD_POLE4-like 75..153 CDD:467054 36/77 (47%)
Pole4XP_063142354.1 None

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