DRSC/TRiP Functional Genomics Resources

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Protein Alignment PolE4 and nfyc

DIOPT Version :10

Sequence 1:NP_611669.1 Gene:PolE4 / 37560 FlyBaseID:FBgn0034726 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_955933.1 Gene:nfyc / 323445 ZFINID:ZDB-GENE-030131-2165 Length:360 Species:Danio rerio


Alignment Length:76 Identity:32/76 - (42%)
Similarity:52/76 - (68%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 KMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKAVELFIASLSRESYTYTAQSKKKTIQKRDVDM 138
            ::.:||||||:.|||||.|:.|.:.||..:.|||.::||..|:..::.:|..:|::|:|:.|:.|
Zfish    37 RVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAM 101

  Fly   139 AISAVDSLLFL 149
            ||:..|...||
Zfish   102 AITKFDQFDFL 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolE4NP_611669.1 HFD_POLE4-like 75..153 CDD:467054 32/75 (43%)
nfycNP_955933.1 HFD_NFYC-like 35..117 CDD:467033 32/76 (42%)

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