DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PolE4 and php5

DIOPT Version :10

Sequence 1:NP_611669.1 Gene:PolE4 / 37560 FlyBaseID:FBgn0034726 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_596412.1 Gene:php5 / 2540133 PomBaseID:SPBC3B8.02 Length:415 Species:Schizosaccharomyces pombe


Alignment Length:131 Identity:38/131 - (29%)
Similarity:66/131 - (50%) Gaps:16/131 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 EPLEITEESPDNP-EAESTTEQLTEKPVTNGNKAPA-------------DNEAKMTQLPLARIRN 85
            :|..:...:...| |..|..:.:|:..|.:..:|.|             |...|...||||||:.
pombe    52 DPTAVNHYNASAPIEVASPFDNVTQGLVGSDAQALAEYWQKTIDTLEHDDQAVKTLHLPLARIKK 116

  Fly    86 IMKLDPDL--HMANNEAVFIVAKAVELFIASLSRESYTYTAQSKKKTIQKRDVDMAISAVDSLLF 148
            :||.|.|:  .|.:.||.|:.||..|:|||.|:..::.:..:::::|:|:.|:..|:|..:...|
pombe   117 VMKTDDDVKNKMISAEAPFLFAKGSEIFIAELTMRAWLHAKKNQRRTLQRSDIANAVSKSEMYDF 181

  Fly   149 L 149
            |
pombe   182 L 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolE4NP_611669.1 HFD_POLE4-like 75..153 CDD:467054 28/77 (36%)
php5NP_596412.1 HAP5 1..287 CDD:227533 38/131 (29%)
PRK10263 <237..>415 CDD:236669
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.