DRSC/TRiP Functional Genomics Resources

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Protein Alignment PolE4 and Nfyc

DIOPT Version :10

Sequence 1:NP_611669.1 Gene:PolE4 / 37560 FlyBaseID:FBgn0034726 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001408222.1 Gene:Nfyc / 18046 MGIID:107901 Length:382 Species:Mus musculus


Alignment Length:126 Identity:40/126 - (31%)
Similarity:65/126 - (51%) Gaps:23/126 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PEAESTTEQLTEKPVTNGNKAPADNEA-----------------------KMTQLPLARIRNIMK 88
            |||.|||..:.:.....|....:.::|                       ::.:||||||:.|||
Mouse    36 PEARSTTRWVVKMSTEGGFGGTSSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMK 100

  Fly    89 LDPDLHMANNEAVFIVAKAVELFIASLSRESYTYTAQSKKKTIQKRDVDMAISAVDSLLFL 149
            ||.|:.|.:.||..:.|||.::||..|:..::.:|..:|::|:|:.|:.|||:..|...||
Mouse   101 LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFL 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolE4NP_611669.1 HFD_POLE4-like 75..153 CDD:467054 32/75 (43%)
NfycNP_001408222.1 HFD_NFYC-like 84..166 CDD:467033 32/78 (41%)

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