DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-3 and Qk

DIOPT Version :9

Sequence 1:NP_001246460.1 Gene:qkr58E-3 / 37559 FlyBaseID:FBgn0022984 Length:317 Species:Drosophila melanogaster
Sequence 2:XP_038942853.1 Gene:Qk / 499022 RGDID:1584886 Length:341 Species:Rattus norvegicus


Alignment Length:325 Identity:89/325 - (27%)
Similarity:141/325 - (43%) Gaps:72/325 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METPSEFTEKQPPTHDHQPRLNEVAQKFLADLDEERQRLSADFPLCAL------LIDEAVDRVYC 59
            |||    .||..||.|           :|..|..:::.:|:....|.:      |:||.:.||  
  Rat     5 MET----KEKPKPTPD-----------YLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRV-- 52

  Fly    60 TGRIPGKEFYADVYKQKPMK--------------ITQKVFVPVKQYPKFNFTGKILGPKGNSLRR 110
                 .|:.|.|.......|              :.:|::||||:||.|||.|:||||:|.:.::
  Rat    53 -----RKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQ 112

  Fly   111 LQEETQCKIAIKGRSSIRDRNKEEQLRSTGDPRYAHLQKDLFLEVSTVATPAECYARIAYALAEI 175
            |:.||.|||.::|:.|:||:.||||.|  |.|.:.||.:||.:.::..........::..|:.|:
  Rat   113 LEAETGCKIMVRGKGSMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEV 175

  Fly   176 RKYLIP--DKNDEVSHEQLRELMEMD-PESAKNIHGPNLEAYRSVFDKKFGGNSNGAPKYIN--- 234
            :|.|:|  :..|.:...||.||..:: .....||..|.| |:      .....:..||:.|.   
  Rat   176 KKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPAL-AF------SLAATAQAAPRIITGPA 233

  Fly   235 --LIKRAAENP-PEVDDVEEVAYEYEHRMPPKRPPTGYEYSKPRPSIIPTNAAA------YKRPY 290
              |...|...| |....:..:..:.:..:.|...|      .|..:|:|....|      |:.||
  Rat   234 PVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTP------HPTAAIVPPGPEAGLIYTPYEYPY 292

  Fly   291  290
              Rat   293  292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-3NP_001246460.1 SF1_like-KH 81..200 CDD:239088 47/121 (39%)
QkXP_038942853.1 STAR_dimer 10..66 CDD:406848 16/73 (22%)
KH-I_Hqk 81..183 CDD:411893 42/103 (41%)
PHA03247 <211..314 CDD:223021 19/95 (20%)
Quaking_NLS 312..341 CDD:406855
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348913
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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