DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qkr58E-3 and Qki

DIOPT Version :10

Sequence 1:NP_477306.3 Gene:qkr58E-3 / 37559 FlyBaseID:FBgn0022984 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001152989.1 Gene:Qki / 19317 MGIID:97837 Length:341 Species:Mus musculus


Alignment Length:325 Identity:89/325 - (27%)
Similarity:141/325 - (43%) Gaps:72/325 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METPSEFTEKQPPTHDHQPRLNEVAQKFLADLDEERQRLSADFPLCAL------LIDEAVDRVYC 59
            |||    .||..||.|           :|..|..:::.:|:....|.:      |:||.:.||  
Mouse     5 MET----KEKPKPTPD-----------YLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRV-- 52

  Fly    60 TGRIPGKEFYADVYKQKPMK--------------ITQKVFVPVKQYPKFNFTGKILGPKGNSLRR 110
                 .|:.|.|.......|              :.:|::||||:||.|||.|:||||:|.:.::
Mouse    53 -----RKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQ 112

  Fly   111 LQEETQCKIAIKGRSSIRDRNKEEQLRSTGDPRYAHLQKDLFLEVSTVATPAECYARIAYALAEI 175
            |:.||.|||.::|:.|:||:.||||.|  |.|.:.||.:||.:.::..........::..|:.|:
Mouse   113 LEAETGCKIMVRGKGSMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEV 175

  Fly   176 RKYLIP--DKNDEVSHEQLRELMEMD-PESAKNIHGPNLEAYRSVFDKKFGGNSNGAPKYIN--- 234
            :|.|:|  :..|.:...||.||..:: .....||..|.| |:      .....:..||:.|.   
Mouse   176 KKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPAL-AF------SLAATAQAAPRIITGPA 233

  Fly   235 --LIKRAAENP-PEVDDVEEVAYEYEHRMPPKRPPTGYEYSKPRPSIIPTNAAA------YKRPY 290
              |...|...| |....:..:..:.:..:.|...|      .|..:|:|....|      |:.||
Mouse   234 PVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTP------HPTAAIVPPGPEAGLIYTPYEYPY 292

  Fly   291  290
            Mouse   293  292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-3NP_477306.3 KH-I_KHDRBS 76..177 CDD:411812 40/114 (35%)
QkiNP_001152989.1 STAR_dimer 10..64 CDD:435414 16/71 (23%)
Qua1 domain, involved in homodimerization. /evidence=ECO:0000250|UniProtKB:Q17339 11..82 16/88 (18%)
KH-I_Hqk 81..183 CDD:411893 42/103 (41%)
Qua2 domain, involved in RNA binding. /evidence=ECO:0000250|UniProtKB:Q96PU8 182..213 7/30 (23%)
PHA03247 <211..314 CDD:223021 19/95 (20%)
SH3-binding 276..279 1/2 (50%)
Quaking_NLS 312..341 CDD:435421
Nuclear localization signal. /evidence=ECO:0000269|PubMed:10506177, ECO:0000269|PubMed:29021242 324..330
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.