DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-3 and Khdrbs2

DIOPT Version :9

Sequence 1:NP_001246460.1 Gene:qkr58E-3 / 37559 FlyBaseID:FBgn0022984 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_579852.1 Gene:Khdrbs2 / 170843 RGDID:621738 Length:349 Species:Rattus norvegicus


Alignment Length:349 Identity:112/349 - (32%)
Similarity:169/349 - (48%) Gaps:70/349 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QKFLADLDEERQRLSADFPLCALLIDEAVDRVY-CTGRIPGKE-FYADVYKQKPMKITQKVFVPV 88
            :|:|.:|..|:..|...|...:.|:.|.:::.. ..||...:| .|.||...|.:|::::|.:||
  Rat     4 EKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGRKEDEEKKYLDVISNKNIKLSERVLIPV 68

  Fly    89 KQYPKFNFTGKILGPKGNSLRRLQEETQCKIAIKGRSSIRDRNKEEQLRSTGDPRYAHLQKDLFL 153
            ||||||||.||:|||:||||:||||||..|::|.|:.|:||:.|||:||.:|:.:||||..:|.:
  Rat    69 KQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHV 133

  Fly   154 EVSTVATPAECYARIAYALAEIRKYLIPDKNDEVSHEQLRELMEMD--PES--AKNIHGPNLEAY 214
            .:...|.|.|.|:|:::||.||:|:|:||.|||:..||||||..::  .||  .:.|.|..:...
  Rat   134 LIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSEESGRGRGIRGRGIRIT 198

  Fly   215 RSVFDKKFGG-------NSNG--APKYINLIKRAAENPP-------------------------- 244
            .:...:..||       ...|  .|:...:.:.|...||                          
  Rat   199 PTAPSRGRGGAVPPPPPPGRGVLTPRGTTVTRGALPVPPVARGVPTPRARGTAAVPGYRAPPPPA 263

  Fly   245 ---------------EVDDVEEVAYEYEHRMPPKRPPTGYEYSKPRPSIIPTNAAAYKRPYP--- 291
                           |.||....||:..:..|.:..|..|:|..      ..|..||....|   
  Rat   264 PEAYEEYGYDDGYGGEYDDQTYEAYDNSYVTPTQSVPEYYDYGH------GVNEDAYDSYAPEEW 322

  Fly   292 -TDMKRMREPPIKS----YKPNPY 310
             |....::.||.:|    |:.:||
  Rat   323 TTTRSSLKAPPPRSARGGYREHPY 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-3NP_001246460.1 SF1_like-KH 81..200 CDD:239088 65/120 (54%)
Khdrbs2NP_579852.1 Qua1 6..57 CDD:292891 13/50 (26%)
SF1_like-KH 61..180 CDD:239088 65/118 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..263 11/81 (14%)
Sam68-YY 271..321 CDD:293176 13/55 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..349 7/27 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348929
Domainoid 1 1.000 54 1.000 Domainoid score I10913
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 168 1.000 Inparanoid score I4063
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8931
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.860

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