DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qkr58E-3 and Khdrbs3

DIOPT Version :10

Sequence 1:NP_477306.3 Gene:qkr58E-3 / 37559 FlyBaseID:FBgn0022984 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_034288.2 Gene:Khdrbs3 / 13992 MGIID:1313312 Length:346 Species:Mus musculus


Alignment Length:262 Identity:99/262 - (37%)
Similarity:143/262 - (54%) Gaps:12/262 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QKFLADLDEERQRLSADFPLCALLIDEAVDRVYCTGRIPGKEFYADVYKQKPMKITQKVFVPVKQ 90
            :|:|.:|..|:..|...|.....|::..::: :..|....:|.|.||...|.||:.|||.:||||
Mouse     3 EKYLPELMAEKDSLDPSFTHALRLVNREIEK-FQKGEGKEEEKYIDVVINKNMKLGQKVLIPVKQ 66

  Fly    91 YPKFNFTGKILGPKGNSLRRLQEETQCKIAIKGRSSIRDRNKEEQLRSTGDPRYAHLQKDLFLEV 155
            :|||||.||:|||:||||:||||||..|::|.|:.|:||:.|||:||.:|:.:|.||..||.:.:
Mouse    67 FPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLI 131

  Fly   156 STVATPAECYARIAYALAEIRKYLIPDKNDEVSHEQLRELMEMDPESAKN----IHGPNLEAYRS 216
            ...|.|||.|||:.:||.||:|:||||.|||:...||:||..::..|...    :.|.:....|.
Mouse   132 EVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSENADVPVVRGKSTLRTRG 196

  Fly   217 VFD---KKFGGNSNGAPKYINLIKRAAENPPEVDDVEEVAYEYEHRMPPKR---PPTGYEYSKPR 275
            |..   .:..|.....|..:. :.|....|..|.............:.|:.   |||||....|.
Mouse   197 VTTPAITRGRGGVTARPVAVG-VPRGTPTPRGVLSTRGPVSRGRGLLTPRARGVPPTGYRPPPPP 260

  Fly   276 PS 277
            |:
Mouse   261 PT 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-3NP_477306.3 KH-I_KHDRBS 76..177 CDD:411812 58/100 (58%)
Khdrbs3NP_034288.2 Involved in homodimerization. /evidence=ECO:0000250|UniProtKB:O75525 1..160 75/157 (48%)
Qua1 4..53 CDD:465079 12/49 (24%)
KH-I_KHDRBS3 48..160 CDD:411898 64/111 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..266 12/52 (23%)
Sam68-YY 266..320 CDD:465182
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..346
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.