DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-3 and KHDRBS1

DIOPT Version :9

Sequence 1:NP_001246460.1 Gene:qkr58E-3 / 37559 FlyBaseID:FBgn0022984 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_006550.1 Gene:KHDRBS1 / 10657 HGNCID:18116 Length:443 Species:Homo sapiens


Alignment Length:309 Identity:99/309 - (32%)
Similarity:148/309 - (47%) Gaps:62/309 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PPTHDHQPRLNEVAQKFLADLDEERQRLSADFPLCALLIDEAVDRVY-CTGRIPGKEFYADVYKQ 75
            ||:.....:: |...|:|.:|..|:..|...|.....|:...::::. ...:...:|.|.|::..
Human    88 PPSATASVKM-EPENKYLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEENYLDLFSH 151

  Fly    76 KPMKITQKVFVPVKQYPKFNFTGKILGPKGNSLRRLQEETQCKIAIKGRSSIRDRNKEEQLRSTG 140
            |.||:.::|.:||||||||||.||||||:||:::||||||..||::.|:.|:||:.|||:||..|
Human   152 KNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGG 216

  Fly   141 DPRYAHLQKDLFLEVSTVATPAECYARIAYALAEIRKYLIPDKNDEVSHEQLRELMEMD--PESA 203
            ||:||||..||.:.:.....|.|.||.:|:|:.|::|:|:||..|::..||..||..::  ||.:
Human   217 DPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPEPS 281

  Fly   204 KNIHGPNLEAYRSVFDKKFGGNSNGAPKYINLIKRAAENPPEVDDVEEVAYEYEHRMPPKRPPTG 268
            :                     ..|.|    :..|.|..||                ||  .|.|
Human   282 R---------------------GRGVP----VRGRGAAPPP----------------PP--VPRG 303

  Fly   269 YEYSKPRPSIIP--------TNAAAYKRPYPTDMKRMREPPIKSYKPNP 309
            .....||.:::.        |..|...|..|       .||.....|.|
Human   304 RGVGPPRGALVRGTPVRGAITRGATVTRGVP-------PPPTVRGAPAP 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-3NP_001246460.1 SF1_like-KH 81..200 CDD:239088 61/120 (51%)
KHDRBS1NP_006550.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..96 2/7 (29%)
Involved in homodimerization. /evidence=ECO:0000305|PubMed:26758068 100..260 69/159 (43%)
Qua1 102..153 CDD:406639 10/50 (20%)
KH-I_KHDRBS1 152..257 CDD:411896 57/104 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..316 12/78 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..346 7/26 (27%)
Interaction with HNRNPA1. /evidence=ECO:0000269|PubMed:17371836 351..443
Sam68-YY 366..415 CDD:406871
Interaction with ZBTB7A. /evidence=ECO:0000269|PubMed:24514149 400..420
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 411..443
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155063
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5176
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8456
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.810

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