DRSC/TRiP Functional Genomics Resources

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Protein Alignment babos and NTM

DIOPT Version :9

Sequence 1:NP_001286719.1 Gene:babos / 37557 FlyBaseID:FBgn0034724 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001338930.1 Gene:NTM / 50863 HGNCID:17941 Length:367 Species:Homo sapiens


Alignment Length:125 Identity:26/125 - (20%)
Similarity:49/125 - (39%) Gaps:17/125 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 SVTGIRGEDVVLKCDVGSNLHSSDVVVLWYFGDNVI--SNGKNLVQPNFKLDAN----YDLTILK 128
            :||..:||...|:|.:.:.:    ..|.|.....::  .|.|..:.|...|.:|    |.:.|..
Human    44 NVTVRQGESATLRCTIDNRV----TRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQN 104

  Fly   129 ASPQVAGSYLCKVLPSGSVVNTKVTIAEHSLDAIAP---ESSTSAAGSASSFLGCTVLAS 185
            ......|.|.|.|........::|    |.:..::|   |.|:..:.:..:.:..|.:|:
Human   105 VDVYDEGPYTCSVQTDNHPKTSRV----HLIVQVSPKIVEISSDISINEGNNISLTCIAT 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
babosNP_001286719.1 ig 70..154 CDD:278476 20/89 (22%)
IG_like 70..154 CDD:214653 20/89 (22%)
NTMNP_001338930.1 Ig 44..132 CDD:416386 21/95 (22%)
Ig strand A' 44..49 CDD:409353 2/4 (50%)
Ig strand B 51..59 CDD:409353 3/7 (43%)
CDR1 59..63 CDD:409353 0/3 (0%)
FR2 64..70 CDD:409353 2/5 (40%)
Ig strand C 64..70 CDD:409353 2/5 (40%)
CDR2 71..83 CDD:409353 2/11 (18%)
Ig strand C' 72..76 CDD:409353 0/3 (0%)
Ig strand C' 80..83 CDD:409353 1/2 (50%)
FR3 84..118 CDD:409353 8/33 (24%)
Ig strand D 87..94 CDD:409353 1/6 (17%)
Ig strand E 97..103 CDD:409353 1/5 (20%)
Ig strand F 110..118 CDD:409353 3/7 (43%)
CDR3 119..123 CDD:409353 0/3 (0%)
Ig strand G 123..132 CDD:409353 2/12 (17%)
FR4 125..132 CDD:409353 2/10 (20%)
Ig_3 136..205 CDD:404760 5/25 (20%)
Ig strand A' 142..147 CDD:409353 1/4 (25%)
Ig strand B 153..160 CDD:409353 1/6 (17%)
Ig strand C 166..171 CDD:409353
Ig strand D 177..180 CDD:409353
Ig strand E 184..190 CDD:409353
Ig strand F 197..204 CDD:409353
Ig strand G 211..219 CDD:409353
Ig_3 222..299 CDD:404760
putative Ig strand A 223..229 CDD:409353
Ig strand B 239..243 CDD:409353
Ig strand C 252..256 CDD:409353
Ig strand E 278..282 CDD:409353
Ig strand F 292..297 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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