DRSC/TRiP Functional Genomics Resources

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Protein Alignment babos and DIP-gamma

DIOPT Version :9

Sequence 1:NP_001286719.1 Gene:babos / 37557 FlyBaseID:FBgn0034724 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster


Alignment Length:135 Identity:37/135 - (27%)
Similarity:51/135 - (37%) Gaps:14/135 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EDQSAPSPQTKSPNPVASEKINKTLSVTGIRGEDVVLKCDV---GSN----LHSSDVVVLWYFGD 102
            ::|...|.....|:|   |.|....:||...|.:.:|.|.|   |.|    |.:||..||...|.
  Fly    25 QNQHHESSSQLDPDP---EFIGFINNVTYPAGREAILACSVRNLGKNKVGWLRASDQTVLALQGR 86

  Fly   103 NVISNGKNLVQPNFKLDAN-YDLTILKASPQVAGSYLCKVLPSGSVVNTKVTIAEHSLDAIAPES 166
            .|..|.:..|...   |.: :.|.|.|......|.|:|::..|...........:...|.|..||
  Fly    87 VVTHNARISVMHQ---DMHTWKLKISKLRESDRGCYMCQINTSPMKKQVGCIDVQVPPDIINEES 148

  Fly   167 STSAA 171
            |...|
  Fly   149 SADLA 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
babosNP_001286719.1 ig 70..154 CDD:278476 25/91 (27%)
IG_like 70..154 CDD:214653 25/91 (27%)
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 25/94 (27%)
Ig 47..129 CDD:299845 25/84 (30%)
Ig 140..238 CDD:299845 6/14 (43%)
IG_like 247..355 CDD:214653
Ig 256..351 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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