DRSC/TRiP Functional Genomics Resources

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Protein Alignment babos and dpr13

DIOPT Version :9

Sequence 1:NP_001286719.1 Gene:babos / 37557 FlyBaseID:FBgn0034724 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001033956.2 Gene:dpr13 / 3885598 FlyBaseID:FBgn0034286 Length:419 Species:Drosophila melanogaster


Alignment Length:80 Identity:22/80 - (27%)
Similarity:42/80 - (52%) Gaps:15/80 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 VTG--IR----GEDVVLKCDVGSNLHSSDVVVLWYFGDNVIS----NGKNL-VQPNFKLDANYDL 124
            :||  ||    |..:.|:|.|..|..:|: .:.||..:.:|:    .|.|: .:|:|:   :.:|
  Fly   282 ITGPPIRYLTPGSTLRLQCRVVQNTEASE-YIFWYHDNRMINYDIDRGINVSTEPDFQ---SSEL 342

  Fly   125 TILKASPQVAGSYLC 139
            ||.:...:.:|::.|
  Fly   343 TIQRTRREHSGNFTC 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
babosNP_001286719.1 ig 70..154 CDD:278476 22/80 (28%)
IG_like 70..154 CDD:214653 22/80 (28%)
dpr13NP_001033956.2 V-set 180..276 CDD:284989
IG_like 182..262 CDD:214653
IG_like 285..362 CDD:214653 20/77 (26%)
IGc2 292..361 CDD:197706 18/70 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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