DRSC/TRiP Functional Genomics Resources

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Protein Alignment babos and sdk

DIOPT Version :9

Sequence 1:NP_001286719.1 Gene:babos / 37557 FlyBaseID:FBgn0034724 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster


Alignment Length:124 Identity:29/124 - (23%)
Similarity:50/124 - (40%) Gaps:28/124 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 SVTGIRGEDVVLKC-DVGSNLHSSDVVVLWYFGDNVISNGKNLVQPNFKLDANYDLTILKASPQV 133
            :||.:.|:|..:.| .||    |.:..:.|.:.:..:.:..:.||    :..:.||.|.......
  Fly   508 NVTALDGKDATISCRAVG----SPNPNITWIYNETQLVDISSRVQ----ILESGDLLISNIRSVD 564

  Fly   134 AGSYLC-KVLPSGSV---------VNTKVTIAEHSLDAIAPESSTSAAGSASSFLGCTV 182
            ||.|:| :...:|||         |.|::         |.|...|:.....::.|.|.|
  Fly   565 AGLYICVRANEAGSVKGEAYLSVLVRTQI---------IQPPVDTTVLLGLTATLQCKV 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
babosNP_001286719.1 ig 70..154 CDD:278476 23/94 (24%)
IG_like 70..154 CDD:214653 23/94 (24%)
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653
Ig 378..447 CDD:143165
Ig 506..587 CDD:299845 21/86 (24%)
IG_like 506..587 CDD:214653 21/86 (24%)
I-set 592..682 CDD:254352 6/32 (19%)
Ig 595..682 CDD:299845 5/20 (25%)
FN3 686..789 CDD:238020
FN3 798..893 CDD:238020
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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