DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment babos and rig-3

DIOPT Version :9

Sequence 1:NP_001286719.1 Gene:babos / 37557 FlyBaseID:FBgn0034724 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_509155.1 Gene:rig-3 / 180958 WormBaseID:WBGene00004370 Length:487 Species:Caenorhabditis elegans


Alignment Length:69 Identity:18/69 - (26%)
Similarity:36/69 - (52%) Gaps:12/69 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SAPSPQTKSPNP--VASEKIN-KTLSVTGIRGEDVVLKC--DVGSNLHSSDVVVLWYFGDNVISN 107
            ::.||.:...||  ::||.:: .|.::|...|:.:::.|  :....:|.||  :||     ..:|
 Worm    23 ASDSPSSNEANPIVISSEAMDYDTNTITVREGKKLMVSCVFESDEQIHKSD--LLW-----KQAN 80

  Fly   108 GKNL 111
            |.|:
 Worm    81 GNNI 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
babosNP_001286719.1 ig 70..154 CDD:278476 11/44 (25%)
IG_like 70..154 CDD:214653 11/44 (25%)
rig-3NP_509155.1 IG_like 48..142 CDD:214653 11/44 (25%)
Ig 267..341 CDD:319273
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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