DRSC/TRiP Functional Genomics Resources

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Protein Alignment babos and Ncam2

DIOPT Version :9

Sequence 1:NP_001286719.1 Gene:babos / 37557 FlyBaseID:FBgn0034724 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001106679.1 Gene:Ncam2 / 17968 MGIID:97282 Length:837 Species:Mus musculus


Alignment Length:85 Identity:26/85 - (30%)
Similarity:39/85 - (45%) Gaps:13/85 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PVASEKINKTLSVTGIRGEDVVLKCDVGSNLHSSDVVVLWYFGDNVISNGKNLVQPNFKL---DA 120
            |.|.....|:.:.|..|||::.|.|....   |.|..:.|:      .||| |::.|.|.   .:
Mouse   208 PPAIMMPQKSFNATAERGEEMTLTCKASG---SPDPTISWF------RNGK-LIEENEKYILKGS 262

  Fly   121 NYDLTILKASPQVAGSYLCK 140
            |.:||:.....:..|||:||
Mouse   263 NTELTVRNIINKDGGSYVCK 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
babosNP_001286719.1 ig 70..154 CDD:278476 23/74 (31%)
IG_like 70..154 CDD:214653 23/74 (31%)
Ncam2NP_001106679.1 Ig1_NCAM-2 21..112 CDD:143274
I-set 22..111 CDD:254352
I-set 117..193 CDD:254352
IGc2 128..189 CDD:197706
Ig 208..301 CDD:299845 26/85 (31%)
I-set 215..298 CDD:254352 24/78 (31%)
Ig 300..397 CDD:299845
IG_like 308..395 CDD:214653
IG_like 413..491 CDD:214653
IGc2 414..482 CDD:197706
FN3 496..588 CDD:238020
fn3 594..678 CDD:278470
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 764..810
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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