DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment babos and Papln

DIOPT Version :9

Sequence 1:NP_001286719.1 Gene:babos / 37557 FlyBaseID:FBgn0034724 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001192272.1 Gene:Papln / 170721 MGIID:2386139 Length:1302 Species:Mus musculus


Alignment Length:158 Identity:34/158 - (21%)
Similarity:58/158 - (36%) Gaps:38/158 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PQSSMDDDQMQADDDFDY-----GGEDQSAPSPQTKSPNPVASEKINKTLSVTGI-------RGE 77
            |..|:...::..:|...|     .|:|:.....|.         ::.:.|::||:       .|:
Mouse  1115 PDGSLVISRVDVEDGGYYSCVAFNGQDRDQRWVQL---------RVLRELTITGLPPAVTVAEGD 1170

  Fly    78 DVVLKCDVGSNLHSSDVVVLWYFGDNVISNGKNLVQPNFKLDANYDLTIL--KASPQVAGSYLCK 140
            ...|.|.|.    ...|.:.|      ..||..:.....::..:.|.|:|  ...|:..|||.|.
Mouse  1171 TARLLCVVA----GESVNIRW------SRNGLPIQADGHRVHQSPDGTLLIHNLRPRDEGSYTCS 1225

  Fly   141 VLPSGSVV--NTKVTIAEHSLDAIAPES 166
            .......|  :|:|.:|   |.|.|.:|
Mouse  1226 AFRGSQAVSRSTEVKVA---LPAPAAQS 1250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
babosNP_001286719.1 ig 70..154 CDD:278476 21/94 (22%)
IG_like 70..154 CDD:214653 21/94 (22%)
PaplnNP_001192272.1 TSP1 30..81 CDD:214559
ADAM_spacer1 184..299 CDD:368694
TSP1 309..362 CDD:214559
TSP1 389..447 CDD:214559
TSP1 447..504 CDD:214559
TSP1 511..562 CDD:214559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..648
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..737
Kunitz_BPTI 771..822 CDD:333766
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..924
Papilin_u7 831..922 CDD:374683
Ig 932..>995 CDD:386229
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1024..1064
I-set 1070..1141 CDD:369462 5/25 (20%)
Ig 1157..1241 CDD:386229 21/93 (23%)
PLAC 1257..1289 CDD:370061
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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