Protein Alignment CG13506 and Negr1

DIOPT Version :10

• Sequence 1: NP_611666.2
• Gene: CG13506 / 37556
• FlyBaseID: FBgn0034723
• Length: 503
• Species: Drosophila melanogaster
• Sequence 2: XP_063138498.1
• Gene: Negr1 / 59318
• RGDID: 708416
• Length: 423
• Species: Rattus norvegicus
• Alignment Length: 393
• Identity: 84/393 - (21%)
• Similarity: 140/393 - (35%)
• Gaps: 81/393 - (20%)

  Fly    70 PYFDVTDLRVEAKPGDDVILNCDARNFQLSNAVVWY-KNRIIIANGQN-PISQRVQCMLNN---- 128
            |:..|.::.|  :.||..:|.|...:.....|  |. ::.||.|.|.. .:..||.....|
  Rat    35 PWAAVDNMLV--RKGDTAVLRCYLEDGASKGA--WLNRSSIIFAGGDKWSVDPRVSISTLNKRDY 95

  Fly   129 SILLRNVSPEDSDDYYCEI----LPQRVRQHTALRVGARLSILCDDRDITDRSQTFRQGDHHKLE 189
            |:.::||...|...|.|.:    .|:.::.|..::|..::..:.:|       .|..:|.:..|.
  Rat    96 SLQIQNVDVTDDGPYTCSVQTQHTPRTMQVHLTVQVPPKIYDISND-------MTINEGTNVTLT 153

  Fly   190 C-RTYLPDNATIKWSFNDLNGQPSSVDNQNGVII-LDNVDEKNAGDYQCLADDGSRHPPHGTVHI 252
            | .|..|:.| |.|.    :..||:...:||..: :..:....||:|:|.|::....|....|.:
  Rat   154 CLATGKPEPA-ISWR----HISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVSFPDVKKVRV 213

  Fly   253 DVQYSPIVSTHRHNVNTEKGATAELYCNYRAKPIGRSYFIKDGKTLQLSDKYSLKDSVHNDHNRT 317
            .|.::|.:...:....| .|.:..:.|.....|.....:.|..|.|....:..:   :.|...|:
  Rat   214 VVNFAPTIQEIKSGTVT-PGRSGLIRCEGAGVPPPAFEWYKGEKRLFNGQQGII---IQNFSTRS 274

  Fly   318 TLIVREVTDSDLGEYLCQVENAIGSNEVKVHVSYNPETPQFEDMTVEGNKVTLHWLVRSHQLLSE 382
            .|.|..||....|.|.|...|.:|:....:     |.....|..|             |..:.|.
  Rat   275 ILTVTNVTQEHFGNYTCVAANKLGTTNASL-----PLNQIIEPTT-------------SSPVTSP 321

  Fly   383 AMLDYQLTGSYTW-----STV--------QVLETHRHNNTDNI-----------------WKITH 417
            ....:..| .|.|     |.:        |:|..|||.....:                 |.:|.
  Rat   322 GQYPHTFT-KYVWVLFLSSKISALSQKHSQLLLGHRHGCGSGVCHLSCLSVMWSPSVSYEWCLTR 385

  Fly   418 QLE 420
            .||
  Rat   386 LLE 388

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG13506	NP_611666.2	Ig_3	69..146	CDD:464046	21/81 (26%)
		Ig_3	173..238	CDD:464046	17/66 (26%)
		Ig	258..349	CDD:472250	19/90 (21%)
		Ig strand B	275..279	CDD:409353	0/3 (0%)
		Ig strand C	288..292	CDD:409353	0/3 (0%)
		Ig strand E	317..321	CDD:409353	1/3 (33%)
		Ig strand F	331..336	CDD:409353	2/4 (50%)
Negr1	XP_063138498.1	None