DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13506 and ncam3

DIOPT Version :9

Sequence 1:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster
Sequence 2:XP_017207042.1 Gene:ncam3 / 566122 ZFINID:ZDB-GENE-131127-340 Length:688 Species:Danio rerio


Alignment Length:538 Identity:102/538 - (18%)
Similarity:185/538 - (34%) Gaps:119/538 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLIGQLYVSCAG---SPIDADVKGTDYQ-----------DDEYEY-----GDDTDDD-------- 52
            ||.|.|.: |:|   :.:|..:...|.|           |.|.:.     |:|.|.|        
Zfish     3 LLCGLLLI-CSGLIDAKLDIILGDPDVQVGNSILLLCKADTEGDINWLKDGEDVDTDRHVVEKND 66

  Fly    53 ---------DTQIIDVTKNHAEQE----------------APPYFDVTDLRVEAKPGDDVILNCD 92
                     :.|:.|..:...|.|                ..|.|..|....|.......|:.|.
Zfish    67 ESSSTLNLKNVQLSDTGRYTCEFEDSNGNKKTTNSQIYVYKTPDFGQTRTFHEFLVNQTAIIPCM 131

  Fly    93 ARNFQLSNAVVWYKN-RIIIANGQNPISQRVQCMLNNSILLRNVSPEDSDDYYCEILPQRVRQHT 156
            ... :....:.|::| |:|..:|::    .::.:.:.::::..:..||...|.||   .:::...
Zfish   132 VTG-KPEVEIHWFRNDRMIHDDGRS----HLKILPDRTLMIVGIQHEDRGTYICE---GKIKGRP 188

  Fly   157 ALRVGARLSILCDDRD---ITDRSQTFRQGDHHKLE--CRTYLPDNATIKW----SFNDLNGQPS 212
            ..| ...:|::.::..   |.:..::...|.:..|.  |........||.|    ||||..   .
Zfish   189 ITR-NLPISVVVNEPPTVLIHEEKKSVFAGPNTSLSIACLVKGAPVPTITWTTPSSFNDYR---Y 249

  Fly   213 SVDNQNGVIILDNVDEKNAGDYQCLADDGSRHPPHGTVHIDVQYSPIVSTHRHNVNTEKGATAEL 277
            |.:.....:.:..|...:.|:|.|.|.:.........| :||...|.|....:.::...|.:|.:
Zfish   250 SYNTDKSELTISAVTRSDYGEYICTASNKIGESSAIFV-LDVSELPTVVFTENKLSIIPGESASV 313

  Fly   278 YCNYRAKPIGRSYFIKDGKTLQLSDKYSLKDSVHNDHNRTTLIVREVTDSDLGEYLCQVENAIGS 342
            :||....|.....:::             ||:.........||:..:..||.|.|.|...|.:|:
Zfish   314 FCNATGHPAPAVQWVR-------------KDTQQKMSGEPELILENIMPSDGGFYSCIATNIVGT 365

  Fly   343 NEVKVHVSYNPETP-QFEDMTVEGNKVTLHWLVRSHQLLSEAMLDYQLTGS-YTWSTVQVLETHR 405
            ......:...|||| ||.......:.:.:|            .:..|..|| .::..:|..:...
Zfish   366 TTGDFQLITWPETPSQFSMSAGSSSAILIH------------SVSVQDGGSPISYYILQWKKPSE 418

  Fly   406 HNNTDNIWKITHQLELS----RGVWHARVKTKNTKGWSHFSND-HVFEIPEDSEVD--------- 456
            .|...||.|..:.|.:.    ...:..|:..||:....:||.: ::|......|.|         
Zfish   419 DNWNQNIVKPAYPLMIKDLEPYTEYSVRIAAKNSHYQGNFSTEQNIFTQSRHGEPDSPVLSLSEK 483

  Fly   457 --KDEEVELPPDEIVQAG 472
              :...|.:|..::...|
Zfish   484 KLEKNSVSIPIKQLKDGG 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13506NP_001286718.1 IG_like 79..146 CDD:214653 11/67 (16%)
IGc2 83..146 CDD:197706 10/63 (16%)
IG_like 176..254 CDD:214653 17/83 (20%)
Ig 176..239 CDD:299845 15/68 (22%)
I-set 258..349 CDD:254352 18/90 (20%)
Ig 275..348 CDD:143165 15/72 (21%)
ncam3XP_017207042.1 I-set 18..99 CDD:254352 13/80 (16%)
IGc2 31..94 CDD:197706 10/62 (16%)
IG_like 122..197 CDD:214653 13/83 (16%)
IGc2 123..182 CDD:197706 12/66 (18%)
Ig 202..290 CDD:299845 18/91 (20%)
I-set 212..290 CDD:254352 17/81 (21%)
IGc2 307..364 CDD:197706 15/69 (22%)
FN3 376..466 CDD:238020 21/101 (21%)
fn3 <499..558 CDD:278470 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45080
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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