DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13506 and Ntm

DIOPT Version :9

Sequence 1:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster
Sequence 2:XP_017451354.1 Gene:Ntm / 50864 RGDID:620958 Length:367 Species:Rattus norvegicus


Alignment Length:316 Identity:71/316 - (22%)
Similarity:115/316 - (36%) Gaps:48/316 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 VEAKPGDDVILNCDARNFQLSNAVVWYKNRIIIANGQNP--ISQRVQCMLNN----SILLRNVSP 137
            |..:.|:...|.|...|  ....|.|.....|:..|.:.  :..||..:.|.    ||.::||..
  Rat    45 VTVRQGESATLRCTIDN--RVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEIQNVDV 107

  Fly   138 EDSDDYYCEIL----PQRVRQHTALRVGARLSILCDDRDITDRSQTFRQGDHHKLECRTYLPDNA 198
            .|...|.|.:.    |:..|.|..::|..::..:..|..|       .:|::..|.|........
  Rat   108 YDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDISI-------NEGNNISLTCIATGRPEP 165

  Fly   199 TIKWSFNDLNGQPSSVD--NQNGVIILDNVDEKNAGDYQCLADDGSRHPPHGTVHIDVQYSPIVS 261
            |:.|.    :..|.:|.  :::..:.:..:..:.:|:|:|.|.:....|....|.:.|.|.|.:|
  Rat   166 TVTWR----HISPKAVGFVSEDEYLEIQGITREQSGEYECSASNDVAAPVVRRVKVTVNYPPYIS 226

  Fly   262 THRHNVNTEKGATAELYCNYRAKPIGRSYFIKDGKTLQLSDKYSLKDSVHNDHNRTTLIVREVTD 326
            ..: ......|....|.|...|.|.....:.||.|.| :..|..:|  |.|....:.|....|::
  Rat   227 EAK-GTGVPVGQKGTLQCEASAVPSAEFQWFKDDKRL-VEGKKGVK--VENRPFLSRLTFFNVSE 287

  Fly   327 SDLGEYLCQVENAIGSNEVKVHVSYNPETPQFEDMTVEGNKVTLHWLVRSHQLLSE 382
            .|.|.|.|...|.:|.....:             |..|.|:.|      |..||.|
  Rat   288 HDYGNYTCVASNKLGHTNASI-------------MLFELNEPT------SSTLLQE 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13506NP_001286718.1 IG_like 79..146 CDD:214653 18/72 (25%)
IGc2 83..146 CDD:197706 17/68 (25%)
IG_like 176..254 CDD:214653 13/79 (16%)
Ig 176..239 CDD:299845 10/64 (16%)
I-set 258..349 CDD:254352 23/90 (26%)
Ig 275..348 CDD:143165 20/72 (28%)
NtmXP_017451354.1 Ig 44..132 CDD:416386 22/88 (25%)
Ig strand A' 44..49 CDD:409353 1/3 (33%)
Ig strand B 51..59 CDD:409353 2/7 (29%)
CDR1 59..63 CDD:409353 1/5 (20%)
FR2 64..70 CDD:409353 2/5 (40%)
Ig strand C 64..70 CDD:409353 2/5 (40%)
CDR2 71..83 CDD:409353 2/11 (18%)
Ig strand C' 72..76 CDD:409353 1/3 (33%)
Ig strand C' 80..83 CDD:409353 0/2 (0%)
FR3 84..118 CDD:409353 10/33 (30%)
Ig strand D 87..94 CDD:409353 2/6 (33%)
Ig strand E 97..103 CDD:409353 2/5 (40%)
Ig strand F 110..118 CDD:409353 2/7 (29%)
CDR3 119..123 CDD:409353 0/3 (0%)
Ig strand G 123..132 CDD:409353 3/8 (38%)
FR4 125..132 CDD:409353 2/6 (33%)
Ig_3 136..205 CDD:404760 13/79 (16%)
Ig strand A' 144..148 CDD:409353 2/10 (20%)
Ig strand B 151..160 CDD:409353 2/8 (25%)
Ig strand F 197..205 CDD:409353 4/7 (57%)
Ig 223..307 CDD:416386 23/87 (26%)
putative Ig strand A 223..229 CDD:409353 2/5 (40%)
Ig strand B 239..243 CDD:409353 1/3 (33%)
Ig strand C 252..256 CDD:409353 0/3 (0%)
Ig strand E 278..282 CDD:409353 1/3 (33%)
Ig strand F 292..297 CDD:409353 2/4 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337211
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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