DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13506 and fipi

DIOPT Version :10

Sequence 1:NP_611666.2 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_787975.1 Gene:fipi / 33676 FlyBaseID:FBgn0031627 Length:450 Species:Drosophila melanogaster


Alignment Length:503 Identity:90/503 - (17%)
Similarity:169/503 - (33%) Gaps:165/503 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 NFQLSNAVVWYKNRIIIANGQNPISQRVQCMLNNSILLRNVSPEDSDDYYC-----EILPQR--- 151
            |.....||.|..:...::  .:|....|....|.|::::..||:...:.:.     ||:.:.   
  Fly     9 NLAALTAVAWANHHESLS--LSPAEHSVVRYTNESLIVQCRSPDPKVELHWKSPKGEIIREHKGR 71

  Fly   152 -------------VRQHTALRVGARLSILCDDRDITDRS-----------------QTFRQGDHH 186
                         |..|.||......|....|..:..:|                 .|.::|:..
  Fly    72 IHIEQTSTEQLKIVFAHIALADKGNWSCEAADGSLHSKSFDLIVYQKITFTENATVMTVKEGEKA 136

  Fly   187 KLECRTYLPDNATIKWSFNDLNGQPSSV----DNQNGV----IILDNVDEKNAGDYQC------- 236
            .:.|.........:.|.|   ||||.|.    |::..:    ::::.|.:.:.|:|.|       
  Fly   137 TILCEVKGEPQPNVTWHF---NGQPISAGAADDSKFRILADGLLINKVTQNDTGEYACRAYQVNS 198

  Fly   237 LADDGSRHPPHGTVHIDVQYSPI------VSTHRHNVNTEKGATAELYCNYRAKPIGR-SYFIKD 294
            :|.|....    ||.:.:::.||      ||.....:|    .||.|.|...|:|... :::.|.
  Fly   199 IASDMQER----TVLMKIEHKPIWSKTPFVSLKYAYIN----GTATLMCEALAEPPANFTWYRKH 255

  Fly   295 GKTLQLSDKYSLKDSVHNDHNRTTLIVREVTDSDLGEYLCQVENAIGSNE--VKVHVSYNPETPQ 357
            .|....:..|    ::.:|...::|.:..:..|....|.|:..|.:|:.|  .::.....|.:| 
  Fly   256 NKLHSNNRLY----TIQSDSYWSSLTIHVLNTSAFDNYRCRARNDLGTIERTTRLEQGEKPPSP- 315

  Fly   358 FEDMTVEGNKVTLHWLVRSHQLLSEAMLDYQLTGSYTWSTVQVLETHRHNNTD-----NIWKITH 417
                                       .::||.| :..:|..|:.:......|     |.::|.:
  Fly   316 ---------------------------ANFQLRG-FNSNTFDVVLSAPRGPPDSPMGVNGFRIEY 352

  Fly   418 QLEL----SRGVW-HARVK--------------------------TKNTKGWSHFSNDHVFEIPE 451
            ..|:    ..|.| :||.|                          ::|..|:|.|          
  Fly   353 MTEMEFKTDAGKWTNARRKDYAFEEGATFLLTNLEPDTVYLVRAASRNLAGFSDF---------- 407

  Fly   452 DSEVDKDEEVELPPDEIVQAGIMPMSKGAASSMQR-LNVGVILLAALL 498
             ::|:|.:.:.|.|         .:|.|...:... :.:||:.|..|:
  Fly   408 -TKVEKYKTLSLEP---------RVSSGVKETRNMCVELGVMTLMVLM 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13506NP_611666.2 Ig_3 69..146 CDD:464046 10/55 (18%)
Ig_3 173..238 CDD:464046 16/96 (17%)
Ig 258..349 CDD:472250 22/99 (22%)
Ig strand B 275..279 CDD:409353 2/3 (67%)
Ig strand C 288..292 CDD:409353 0/4 (0%)
Ig strand E 317..321 CDD:409353 1/3 (33%)
Ig strand F 331..336 CDD:409353 2/4 (50%)
fipiNP_787975.1 IG_like 33..115 CDD:214653 14/81 (17%)
IgI_Twitchin_like 120..208 CDD:409541 17/94 (18%)
Ig strand A 120..123 CDD:409541 0/2 (0%)
Ig strand A' 127..131 CDD:409541 1/3 (33%)
Ig strand B 134..141 CDD:409541 0/6 (0%)
Ig strand C 149..154 CDD:409541 1/4 (25%)
Ig strand C' 156..159 CDD:409541 2/2 (100%)
Ig strand D 165..170 CDD:409541 1/4 (25%)
Ig strand E 173..178 CDD:409541 0/4 (0%)
Ig strand F 187..195 CDD:409541 3/7 (43%)
Ig strand G 198..208 CDD:409541 2/13 (15%)
IG_like 228..307 CDD:214653 18/86 (21%)
Ig strand B 235..239 CDD:409353 2/3 (67%)
Ig strand C 248..252 CDD:409353 0/3 (0%)
Ig strand E 274..278 CDD:409353 1/3 (33%)
Ig strand F 288..293 CDD:409353 2/4 (50%)
FN3 312..415 CDD:238020 22/142 (15%)

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