DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13506 and DIP-alpha

DIOPT Version :9

Sequence 1:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster


Alignment Length:445 Identity:89/445 - (20%)
Similarity:156/445 - (35%) Gaps:139/445 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 PYFDVTDLRVEAKPGDDVILNCDARNFQLSNAVVWYK--NRIIIANGQNPISQRVQCMLNN---- 128
            |.|..:...|....|.|....|..|:.. ...|.|.|  .:.|.|..:|.|:...:..:::    
  Fly    42 PEFVESISNVSVAVGRDATFTCHVRHLG-GYRVGWLKADTKAIQAIHENVITHNPRVTVSHLDQN 105

  Fly   129 --SILLRNVSPEDSDDYYCE----------------ILPQRVRQHTALRV----GARLSILCDDR 171
              ::.::.||.||...|.|:                |.|..:.:.|:..|    |:.:.:.|..|
  Fly   106 TWNLHIKAVSEEDRGGYMCQLNTDPMKSQIGFLDVVIPPDFISEDTSSDVIVPEGSSVRLTCRAR 170

  Fly   172 DITDRSQTFRQGDHHKLECRTYLPDNATIKWSFNDLNGQPSSVDNQNGVIILDNVDEKNAGDYQC 236
            ...:...|:|:.|.:::    .|.||...|.......|:         |:.|..:.....|.|.|
  Fly   171 GYPEPIVTWRREDGNEI----VLKDNVGTKTLAPSFRGE---------VLKLSKISRNEMGSYLC 222

  Fly   237 LADDGSRHPPHGT--VHIDVQYSPIVSTHRHNVNTEKGATAELYCNYRAKPIGRSYFIKD-GKTL 298
            :|.:|.  ||..:  :.:.:.:.|::......|....|...::.|:..|.|...:|:||| |:.:
  Fly   223 IASNGV--PPSVSKRISLSIHFHPVIQVPNQLVGAPLGTDVQIECHVEASPKSINYWIKDTGEMI 285

  Fly   299 QLSDKYSLKDSVHNDH-NRTTLIVREVTDSDLGEYLCQVENAIG--------------------- 341
            ..|.||.:::|..:.: .:.::|||:....|:|.|.|..:|::|                     
  Fly   286 VTSGKYHVQESSQSMYETKMSMIVRKFQKDDVGSYRCIAKNSLGEVDSSIRLYEIPGPNRNKNPL 350

  Fly   342 ----------------SNEV-----KVHVSYNPETPQFEDMTVE--------------------- 364
                            :|::     :|.|:|.||..:.:..:||                     
  Fly   351 NGGGKGGGAGGSLDADANDILKQKQQVKVTYQPEDEELQYGSVEDFEAEGGEGGGLTPLSPHVYY 415

  Fly   365 --GNKVTLHWLVRS------HQLLSEAMLDYQLTGSYTWSTVQVLETHRHNNTDN 411
              |||...|....|      ||                    |....|.|||.:|
  Fly   416 TSGNKPATHKPGNSGGNQHLHQ--------------------QHHHHHHHNNNNN 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13506NP_001286718.1 IG_like 79..146 CDD:214653 17/74 (23%)
IGc2 83..146 CDD:197706 16/70 (23%)
IG_like 176..254 CDD:214653 17/79 (22%)
Ig 176..239 CDD:299845 13/62 (21%)
I-set 258..349 CDD:254352 26/134 (19%)
Ig 275..348 CDD:143165 22/116 (19%)
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 18/80 (23%)
Ig 51..131 CDD:299845 18/80 (23%)
I-set 144..240 CDD:254352 23/110 (21%)
IGc2 159..228 CDD:197706 17/81 (21%)
Ig 244..337 CDD:299845 24/92 (26%)
I-set 244..337 CDD:254352 24/92 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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