DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13506 and Iglon5

DIOPT Version :9

Sequence 1:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001157990.1 Gene:Iglon5 / 210094 MGIID:2686277 Length:336 Species:Mus musculus


Alignment Length:302 Identity:65/302 - (21%)
Similarity:111/302 - (36%) Gaps:64/302 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 AKPGDDVILNCDARNFQLS-------NAVVWY-KNRIIIANGQNPISQ-RVQCMLNN----SILL 132
            :.|.|:..: |:..|..||       ..|.|. ::.|:.|......|. ||:.::|.    |||:
Mouse    36 SSPADNYTV-CEGDNATLSCFIDEHVTRVAWLNRSNILYAGNDRWTSDPRVRLLINTPEEFSILI 99

  Fly   133 RNVSPEDSDDYYCEI----------------LPQR---VRQHTALRVGARLSILCDDRDITDRSQ 178
            ..|...|...|.|..                :|.|   :....|:..|..:::||......:.:.
Mouse   100 TQVGLGDEGLYTCSFQTRHQPYTTQVYLIVHVPARIVNISSPVAVNEGGNVNLLCLAVGRPEPTV 164

  Fly   179 TFRQGDHHKLECRTYLPDNATIKWSFNDLNGQPSSVDNQNGVIILDNVDEKNAGDYQCLADDGSR 243
            |:||           |.|..|                ::..::.:.::....||:|:|:..:|..
Mouse   165 TWRQ-----------LRDGFT----------------SEGEILEISDIQRGQAGEYECVTHNGVN 202

  Fly   244 HPPHG-TVHIDVQYSPIVSTHRHNVNTEKGATAELYCNYRAKPIGRSYFIKDGKTLQLSDKYSLK 307
            ..|.. .|.:.|.|.|.: |...:..|..|..|.|.|...|.|.....:.||.:.|.......||
Mouse   203 SAPDSRRVLVTVNYPPTI-TDVTSARTALGRAALLRCEAMAVPPADFQWYKDDRLLSSGSAEGLK 266

  Fly   308 DSVHNDHNRTTLIVREVTDSDLGEYLCQVENAIGSNEVKVHV 349
              |..:..|:.|:...|:....|.|.|:..|.:|::...:.:
Mouse   267 --VQTERTRSMLLFANVSARHYGNYTCRAANRLGASSASMRL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13506NP_001286718.1 IG_like 79..146 CDD:214653 20/77 (26%)
IGc2 83..146 CDD:197706 20/75 (27%)
IG_like 176..254 CDD:214653 13/78 (17%)
Ig 176..239 CDD:299845 10/62 (16%)
I-set 258..349 CDD:254352 23/90 (26%)
Ig 275..348 CDD:143165 19/72 (26%)
Iglon5NP_001157990.1 Ig 41..129 CDD:416386 19/88 (22%)
Ig strand A' 41..46 CDD:409353 0/5 (0%)
Ig strand B 48..56 CDD:409353 3/7 (43%)
CDR1 56..60 CDD:409353 0/3 (0%)
FR2 61..68 CDD:409353 2/6 (33%)
Ig strand C 61..67 CDD:409353 2/5 (40%)
CDR2 69..79 CDD:409353 2/9 (22%)
Ig strand C' 71..74 CDD:409353 1/2 (50%)
Ig strand C' 76..79 CDD:409353 0/2 (0%)
FR3 80..115 CDD:409353 11/34 (32%)
Ig strand D 84..91 CDD:409353 2/6 (33%)
Ig strand E 94..100 CDD:409353 3/5 (60%)
Ig strand F 107..115 CDD:409353 2/7 (29%)
CDR3 116..120 CDD:409353 0/3 (0%)
Ig strand G 120..129 CDD:409353 0/8 (0%)
FR4 122..129 CDD:409353 0/6 (0%)
Ig strand A 132..137 CDD:409353 2/4 (50%)
Ig_3 134..199 CDD:404760 15/91 (16%)
Ig strand A' 140..145 CDD:409353 1/4 (25%)
Ig strand B 148..157 CDD:409353 2/8 (25%)
Ig strand C 163..167 CDD:409353 1/3 (33%)
Ig strand D 174..177 CDD:409353 1/18 (6%)
Ig strand E 178..183 CDD:409353 0/4 (0%)
Ig strand F 191..199 CDD:409353 3/7 (43%)
Ig_3 217..295 CDD:404760 21/80 (26%)
putative Ig strand A 218..224 CDD:409353 2/6 (33%)
Ig strand B 234..238 CDD:409353 2/3 (67%)
Ig strand C 247..251 CDD:409353 0/3 (0%)
Ig strand E 274..278 CDD:409353 1/3 (33%)
Ig strand F 288..293 CDD:409353 2/4 (50%)
Ig strand G 301..304 CDD:409353 0/2 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833618
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

Return to query results.
Submit another query.