DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13506 and Il1rl2

DIOPT Version :9

Sequence 1:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_598259.2 Gene:Il1rl2 / 171106 RGDID:621782 Length:561 Species:Rattus norvegicus


Alignment Length:347 Identity:70/347 - (20%)
Similarity:128/347 - (36%) Gaps:86/347 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 VVWYKNRIIIANGQNPIS--QRVQCMLNNS-ILLRNVSPEDSDDYYCEILPQRVRQHTALRVGAR 163
            :.|::     ...::|||  :.|:...:.| ||...::.|||..|.|.|..    .|:..|:...
  Rat    56 LTWHR-----TPSKSPISINRHVRIHQDQSWILFLPLALEDSGIYQCVIKD----AHSCYRIAIN 111

  Fly   164 LSIL----CD---DRDITDRSQTFRQ----GDHHKLECRTYLPDNA---TIKWSFNDLNGQPSSV 214
            |::.    ||   :....:.|..::|    |....|.|..|.|::.   :|||.......:.|..
  Rat   112 LTVFRKHWCDSSNEESSINSSDEYQQWLPIGKSGSLTCHLYFPESCVLDSIKWYKGCEEIKVSKK 176

  Fly   215 DNQNGV-IILDNVDEKNAGDYQCLA----------------------DDGSR-----HPPHGTVH 251
            ....|. ::::|:|.:::|.|.|.|                      ..|.|     :|.:.::.
  Rat   177 FCPTGTKLLVNNIDVEDSGSYACSARLTHLGRIFTVRNYIAVNTKEVGSGGRIPNITYPKNNSIE 241

  Fly   252 IDVQYSPIVSTHRHNVNTEKGATAELYCNYRAKPIGRSYFIKDGKTLQ--LSDKYSLKDSVHNDH 314
            :.:..:.||..   |:...|..| .|.| :|........:..|.|.:|  :....||::.:....
  Rat   242 VQLGSTLIVDC---NITDTKENT-NLRC-WRVNNTLVDDYYNDSKRIQEGIETNLSLRNHILYTV 301

  Fly   315 NRTTLIVREVTDSDLGE-YLCQVENAIGSNEVKVHVSYNPETPQFEDMTVEGNKVTLHWLVRSHQ 378
            |.|.|   ||...|.|. :.|.      :.....::......|.|....:.|        :.:..
  Rat   302 NITFL---EVKMEDYGHPFTCH------AGVSAAYIILKRPAPDFRAYLIGG--------LMAFL 349

  Fly   379 LLSEAMLDYQLTGSYTWSTVQV 400
            ||:.::|       |.::|.:|
  Rat   350 LLAVSIL-------YIYNTFKV 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13506NP_001286718.1 IG_like 79..146 CDD:214653 12/46 (26%)
IGc2 83..146 CDD:197706 12/46 (26%)
IG_like 176..254 CDD:214653 21/112 (19%)
Ig 176..239 CDD:299845 18/92 (20%)
I-set 258..349 CDD:254352 21/93 (23%)
Ig 275..348 CDD:143165 16/75 (21%)
Il1rl2NP_598259.2 Ig 26..115 CDD:416386 17/67 (25%)
Ig strand A' 31..35 CDD:409353
Ig strand B 39..44 CDD:409353
Ig strand C 55..59 CDD:409353 0/2 (0%)
Ig strand C' 64..66 CDD:409353 0/1 (0%)
Ig strand D 74..78 CDD:409353 0/3 (0%)
Ig strand E 80..84 CDD:409353 2/3 (67%)
Ig strand F 93..101 CDD:409353 3/7 (43%)
Ig strand G 104..115 CDD:409353 2/10 (20%)
Ig 133..222 CDD:416386 17/88 (19%)
Ig strand A 135..140 CDD:409353 1/4 (25%)
Ig strand B 145..149 CDD:409353 1/3 (33%)
Ig strand C 161..166 CDD:409353 3/4 (75%)
Ig strand C' 169..171 CDD:409353 0/1 (0%)
Ig strand D 176..180 CDD:409353 0/3 (0%)
Ig strand E 182..187 CDD:409353 0/4 (0%)
Ig strand F 196..205 CDD:409353 3/8 (38%)
Ig strand G 208..221 CDD:409353 0/12 (0%)
Ig 230..330 CDD:416386 22/113 (19%)
Ig strand A 230..233 CDD:409353 0/2 (0%)
Ig strand A' 238..241 CDD:409353 0/2 (0%)
Ig strand B 246..255 CDD:409353 3/11 (27%)
Ig strand C 262..268 CDD:409353 2/6 (33%)
Ig strand C' 270..273 CDD:409353 0/2 (0%)
Ig strand E 296..303 CDD:409353 0/6 (0%)
Ig strand G 322..330 CDD:409353 0/7 (0%)
TIR 389..539 CDD:396246
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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