DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13506 and Dscaml1

DIOPT Version :9

Sequence 1:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:621 Identity:118/621 - (19%)
Similarity:213/621 - (34%) Gaps:172/621 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QLYVSCA--GSP-------IDAD--VKGTDYQDDEYEYGDDT-----DDDDTQIID------VTK 61
            |..:.||  |:|       :|.:  |:...::.::|...|.|     :....||.|      ..:
Mouse   424 QFSLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTAR 488

  Fly    62 N---HAEQEA------PPYFDVTDLR-VEAKPGDDVILNCDARNFQLSNAVVWYKNRIIIANGQN 116
            |   .||.:|      ||  .:..:| :.|..|.|.::||....:.. .::.|||:.:::     
Mouse   489 NSVGSAEYQARINVRGPP--SIRAMRNITAVAGRDTLINCRVIGYPY-YSIKWYKDALLL----- 545

  Fly   117 PISQRVQCMLNNSILLRNVSP-EDSDDYYCEIL--PQ-RVRQ--HTALRV--------------G 161
            |.:.|.....|.::.|.:|.. .|..:|.|.:|  || .:.|  |.|::|              |
Mouse   546 PDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPASIG 610

  Fly   162 ARLSILC--DDRDITDR------SQTFRQGDHHKLECRTYL------------------------ 194
            ..|.|.|  ...|:..|      .|....|....:|.:.::                        
Mouse   611 QLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAA 675

  Fly   195 --------------------PDN--------------------ATIKWSFNDLNGQPSSVDN--- 216
                                |:|                    ..:.|.....:|.|.....   
Mouse   676 ATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPVPL 740

  Fly   217 -------QNGVIILDNVDEKNAGDYQCLADDGSRHPPHGTVHIDVQYSPIVSTHRHNVNTEKGAT 274
                   .|..:::.:|.|::.|.|.|.|.:|........:.:.|:...::::|.:.....||..
Mouse   741 TGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKAMFLTVKIPAMITSHPNTTIAIKGHP 805

  Fly   275 AELYCNYRAKPIGRSYFIK--DGKTLQLSD---KYSLKDSVHNDHNRTTLIVREVTDSDLGEYLC 334
            .||.|..|.:   |...|:  .|.|:...|   :|::....:.|...:||.::.....|...:.|
Mouse   806 KELNCTARGE---RPIIIRWEKGDTVIDPDRVMRYAIATKDNGDEVVSTLKLKPADRGDSVFFSC 867

  Fly   335 QVENAIGSNE--VKVHVSYNPETPQFEDMTVEGNKVTLHWLVR--SHQLLSEAMLDYQLTGSYTW 395
            ...|:.|.:.  :::.|...|:.|:.|...|:...:.|.|..|  .:.:::...::|: ..|.:|
Mouse   868 HAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYK-NKSDSW 931

  Fly   396 STVQVLETHRHNNTDNIWKITHQLEL----SRGVWHARVKTKNTKGWSHFSNDHVFEIPEDSEVD 456
            ...|        :|.||....:|..:    ...|:..|:.:.|..|.|..|.:......|.:...
Mouse   932 DFKQ--------STRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDG 988

  Fly   457 KDEEVELPPDEIVQAGIMPMSKGAASSMQRLNVGVI 492
            ...:|.|.|  :....|....|.....:|.   |||
Mouse   989 PPMDVTLQP--VTSQSIQVTWKAPKKELQN---GVI 1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13506NP_001286718.1 IG_like 79..146 CDD:214653 15/67 (22%)
IGc2 83..146 CDD:197706 14/63 (22%)
IG_like 176..254 CDD:214653 17/157 (11%)
Ig 176..239 CDD:299845 15/142 (11%)
I-set 258..349 CDD:254352 20/97 (21%)
Ig 275..348 CDD:143165 17/79 (22%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706
Ig 125..218 CDD:353325
I-set 226..311 CDD:336764
Ig_3 317..389 CDD:339005
Ig 408..498 CDD:353325 16/73 (22%)
IGc2 519..577 CDD:197706 15/63 (24%)
Ig 615..681 CDD:319273 7/65 (11%)
Ig_DSCAM 707..785 CDD:143211 11/77 (14%)
Ig 803..891 CDD:353325 20/90 (22%)
FN3 887..981 CDD:238020 21/102 (21%)
FN3 988..1085 CDD:238020 9/37 (24%)
FN3 1093..1186 CDD:238020
FN3 1191..1282 CDD:238020
Ig 1307..1377 CDD:319273
FN3 1384..1474 CDD:238020
FN3 1488..1560 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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