DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13506 and Il1rl2

DIOPT Version :9

Sequence 1:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001343407.1 Gene:Il1rl2 / 107527 MGIID:1913107 Length:574 Species:Mus musculus


Alignment Length:274 Identity:58/274 - (21%)
Similarity:100/274 - (36%) Gaps:73/274 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 VVWYKNRIIIANGQNPISQRVQCMLNNS---ILLRNVSPEDSDDYYCEILPQRVRQHTALRVGAR 163
            :.|||     ...::|:|......::..   ||...::.|||..|.|.|.    ..|...::...
Mouse    56 LTWYK-----TPSKSPVSNNRHLRVHQDQTWILFLPLTLEDSGIYQCVIR----NAHNCYQIAVN 111

  Fly   164 LSIL----CD---DRDITDRSQTFRQ----GDHHKLECRTYLPDNA---TIKW--SFNDLNG--- 209
            |::|    ||   :....:....::|    |....|.|..|.|::.   :|||  ...::..   
Mouse   112 LTVLKNHWCDSSMEGSPVNSPDVYQQILPIGKSGSLNCHLYFPESCALDSIKWYKGCEEIKAGKK 176

  Fly   210 -QPSSVDNQNGVIILDNVDEKNAGDYQCLA----------------------DDGSR-----HPP 246
             .||...     ::::||..::.|.|.|.|                      :.|.|     :|.
Mouse   177 YSPSGAK-----LLVNNVAVEDGGSYACSARLTHLGRHFTIRNYIAVNTKEVEYGRRIPNITYPK 236

  Fly   247 HGTVHIDVQYSPIVSTHRHNVN-TEKGATAELYCNYRAKPIGRSYFIKDGKTLQ--LSDKYSLKD 308
            :.::.:     |:.||...|.| |:......|.| :|........:.||.|.:|  :....||:|
Mouse   237 NNSIEV-----PLGSTLIVNCNITDTKENTNLRC-WRVNNTLVDDYYKDSKRIQEGIETNVSLRD 295

  Fly   309 SVHNDHNRTTLIVR 322
            .:....|.|.|.|:
Mouse   296 QIRYTVNITFLKVK 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13506NP_001286718.1 IG_like 79..146 CDD:214653 11/46 (24%)
IGc2 83..146 CDD:197706 11/46 (24%)
IG_like 176..254 CDD:214653 20/117 (17%)
Ig 176..239 CDD:299845 17/97 (18%)
I-set 258..349 CDD:254352 20/68 (29%)
Ig 275..348 CDD:143165 14/50 (28%)
Il1rl2NP_001343407.1 Ig 25..115 CDD:416386 15/67 (22%)
Ig strand A' 31..35 CDD:409353
Ig strand B 39..44 CDD:409353
Ig strand C 55..59 CDD:409353 0/2 (0%)
Ig strand C' 64..66 CDD:409353 0/1 (0%)
Ig strand D 74..78 CDD:409353 0/3 (0%)
Ig strand E 80..84 CDD:409353 1/3 (33%)
Ig strand F 93..101 CDD:409353 3/11 (27%)
Ig strand G 104..115 CDD:409353 1/10 (10%)
Ig 135..222 CDD:416386 17/91 (19%)
Ig strand A 135..140 CDD:409353 1/4 (25%)
Ig strand B 145..149 CDD:409353 1/3 (33%)
Ig strand C 161..166 CDD:409353 3/4 (75%)
Ig strand C' 169..171 CDD:409353 0/1 (0%)
Ig strand D 176..180 CDD:409353 0/3 (0%)
Ig strand E 182..187 CDD:409353 0/9 (0%)
Ig strand F 196..205 CDD:409353 3/8 (38%)
Ig strand G 208..221 CDD:409353 0/12 (0%)
Ig 230..332 CDD:416386 21/86 (24%)
Ig strand A 230..233 CDD:409353 0/2 (0%)
Ig strand A' 238..241 CDD:409353 0/2 (0%)
Ig strand B 246..255 CDD:409353 4/8 (50%)
Ig strand C 262..268 CDD:409353 2/6 (33%)
Ig strand C' 270..273 CDD:409353 0/2 (0%)
Ig strand G 322..332 CDD:409353
TIR 389..539 CDD:396246
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.