DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13506 and kirrel1b

DIOPT Version :9

Sequence 1:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster
Sequence 2:XP_017212964.1 Gene:kirrel1b / 100170816 ZFINID:ZDB-GENE-070912-173 Length:801 Species:Danio rerio


Alignment Length:491 Identity:94/491 - (19%)
Similarity:168/491 - (34%) Gaps:161/491 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 VEAKP------GDDVILNCDARNFQLSNAVVWYKNRIIIANGQNP---ISQRVQCMLNNSILLRN 134
            :|..|      |....|.|.:|..:..:.:.|||:.||:......   :|.|.: :...|.|  .
Zfish   129 IEGSPEILLTAGTSFNLTCVSRGAKPMSTIEWYKDGIIVEGAHTSTEVLSDRKR-VTTKSFL--E 190

  Fly   135 VSPEDSD---DYYCEILPQRVRQHTALRVGARLSILCDDRD-----ITDRSQTFRQGDHHKLECR 191
            :.|.|:|   ::.|      |..:.|..:|.|.::..:...     ::...::..:|:..|..|:
Zfish   191 IQPMDTDTGRNFTC------VASNLAAPLGKRSTVTLNIHHPPTVILSIEPRSVLEGERVKFTCQ 249

  Fly   192 -TYLPDNATIKWSFNDLNGQPSSVDNQNGVIILDNVDE---KNAGDY-------QCLADD--GSR 243
             |..|.....:|:              .|.:|||...|   :...|:       .||..:  ||.
Zfish   250 ATANPPIMGYRWA--------------KGGVILDGARESVFETTADHSFFTEPVSCLVFNAVGST 300

  Fly   244 HPPHGTVHIDVQYSPIVSTHRHNVNTEKGATAELYCNYRAKPIGRSYFIKDGKTLQLSDKYSLKD 308
            :.   ::.:||.:.||:......|..:..:...|.|.:...|.....:.|.|.::.||       
Zfish   301 NV---SILVDVHFGPILVVEPRPVTVDVDSDVTLNCKWSGNPPLTLTWTKKGSSMVLS------- 355

  Fly   309 SVHNDHNRTTLIVREVTDSDLGEYLCQ-VENAIGSNEVKVHVSYNPETPQFEDMTVEGNKVTLHW 372
                  |...|.::.|:.:|.|:|:|: :...||..|.:|            .:||.|..:    
Zfish   356 ------NSNQLFLKSVSQADAGQYVCKAIVPRIGVGETEV------------TLTVNGPPI---- 398

  Fly   373 LVRSHQLLSEAMLDYQLTGS------------------YTWSTVQVLETHRHNNTDNIWKITHQL 419
                   :|...:.|.:.|.                  :.|.             :|:|      
Zfish   399 -------ISSEPIQYAVRGEKGEIKCYIASTPPPDKIVWAWK-------------ENVW------ 437

  Fly   420 ELSRG-------VWHARVKTKNTKGWSHFSNDHVFEIPEDSEVDKD--------------EEVEL 463
            |..||       |..:|..|:.....|..:.::|.|....|..:..              ||.::
Zfish   438 EKERGTLLERYTVEQSRPATQGGAVLSTLTINNVMEADFQSTYNCTAWNAFGPGTMIITLEETDI 502

  Fly   464 PPDEIVQAGIMPMSKGAASSMQRLNVGVILLAALLL 499
            ..::||..|::     |..|     ||..:|..|||
Zfish   503 ASEDIVPVGVI-----AGGS-----VGSSILLLLLL 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13506NP_001286718.1 IG_like 79..146 CDD:214653 18/78 (23%)
IGc2 83..146 CDD:197706 17/74 (23%)
IG_like 176..254 CDD:214653 16/90 (18%)
Ig 176..239 CDD:299845 14/73 (19%)
I-set 258..349 CDD:254352 21/91 (23%)
Ig 275..348 CDD:143165 17/73 (23%)
kirrel1bXP_017212964.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.