DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrapper and igsf9ba

DIOPT Version :9

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:XP_009289969.2 Gene:igsf9ba / 567389 ZFINID:ZDB-GENE-060503-729 Length:1475 Species:Danio rerio


Alignment Length:496 Identity:103/496 - (20%)
Similarity:166/496 - (33%) Gaps:136/496 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PTTVKTYENDTVQLPCT-LNTPFRYVRWHRDDVALVDSRHPELPPPDRIMLWPNGSLQVANVQSS 104
            |..|:..|..::.|.|| ...|...|.|.|:...|..:|...:         .:|||.|..:...
Zfish   146 PQYVEAREGGSITLTCTAFGNPKPVVTWLREGDQLTSTRKYTV---------SDGSLTVQAITRE 201

  Fly   105 DTGDYYCEMNSDSGHVVQQHAIEVQLAPQVLIEPSDLTEQRIGAIFEVVCEAQGVP-QPVITWRL 168
            |.|.|.|..:||.|..:....:.||..|.::..|.::| ..|....:..|:|:..| ....||  
Zfish   202 DRGAYSCRAHSDQGEALHTTRLLVQGPPYIVTPPENIT-VNISQNAQFTCQAEAYPGNLTYTW-- 263

  Fly   169 NGNVIQPQSNTGNRQSLILEIK------------SRNQAGLIECVASNGVGEPAVANVYLHVLFS 221
                ...:.|...:..|.|.::            ....||...|..||.:|....|:.||.|.:.
Zfish   264 ----YWEEDNVYFKNDLKLRVRIFIDGTLIIYRVKPEDAGKYTCSPSNSLGISPSASAYLTVQYP 324

  Fly   222 PEVSIPQPVVYTKLGSRAHLECIVEAAPAAT-VKWFHHGLPVALGAH-------------STTHE 272
            ..|....||:|........:.|.|:|.|..| |:|...|.|:.:..:             :...|
Zfish   325 ARVVNMPPVIYVPRKLSGIIRCPVDANPPVTSVRWEKDGYPLRIEKYPGWSQMTDGSIRVAEVTE 389

  Fly   273 SELQTNRSVDH--------------------YVN----------AVRHMLV-------------- 293
            ..|.|...|.:                    |.|          |.|.:::              
Zfish   390 DSLGTYTCVPYNVLGTMGQSPPATLVLKDPPYFNVRPGGEYRQEAGRELVIPCAASGDPEIPTIQ 454

  Fly   294 ---------------------VKSVRNADMGQYECRASNQISVKSGSVEL----TGRPMPCLFKI 333
                                 ..|:...|.|::||.|:|.::..:.|..|    |....|....:
Zfish   455 WRKVGKPSRSKHNLLPSGSLQFVSLSKEDHGEWECVATNVVTSITASTRLFVIGTSPHAPTNVHV 519

  Fly   334 NPGTQSSTSHVLVWQT------ESLLPIMEFKLKFRQIPSNNVTRQVRTNWTELTIPAQATNGLI 392
            :..|.|:.   :.|:.      |....:....:|.:    |:|...   :|..:.:|...     
Zfish   520 SASTSSAN---VSWEPGYDGGFEQTFSVWYGPVKVK----NDVGTH---DWLSIPVPGSQ----- 569

  Fly   393 YITTYTLHGLQPASLYEVSVLARNSFGWSDNSKIVRFATGG 433
              ....:.||:|.:.|:.||||:|..|....|::|...|||
Zfish   570 --MWLVVQGLEPKTAYQFSVLAQNKLGTGPFSEVVTVTTGG 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 Ig 41..124 CDD:299845 23/83 (28%)
IG_like 41..118 CDD:214653 22/77 (29%)
IG_like 145..218 CDD:214653 18/85 (21%)
Ig 147..219 CDD:299845 17/84 (20%)
I-set 224..323 CDD:254352 30/181 (17%)
IGc2 236..314 CDD:197706 24/156 (15%)
FN3 339..431 CDD:238020 20/97 (21%)
igsf9baXP_009289969.2 IG 30..115 CDD:214652
I-set 139..225 CDD:254352 23/87 (26%)
I-set 229..321 CDD:333254 21/98 (21%)
Ig 345..415 CDD:325142 13/69 (19%)
Ig 438..503 CDD:319273 8/64 (13%)
FN3 511..606 CDD:238020 22/111 (20%)
FN3 622..706 CDD:238020
Atrophin-1 <924..1361 CDD:331285
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.