DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrapper and Ntm

DIOPT Version :9

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:XP_017451354.1 Gene:Ntm / 50864 RGDID:620958 Length:367 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 Ig 41..124 CDD:299845
IG_like 41..118 CDD:214653
IG_like 145..218 CDD:214653
Ig 147..219 CDD:299845
I-set 224..323 CDD:254352
IGc2 236..314 CDD:197706
FN3 339..431 CDD:238020
NtmXP_017451354.1 Ig 44..132 CDD:416386
Ig strand A' 44..49 CDD:409353
Ig strand B 51..59 CDD:409353
CDR1 59..63 CDD:409353
FR2 64..70 CDD:409353
Ig strand C 64..70 CDD:409353
CDR2 71..83 CDD:409353
Ig strand C' 72..76 CDD:409353
Ig strand C' 80..83 CDD:409353
FR3 84..118 CDD:409353
Ig strand D 87..94 CDD:409353
Ig strand E 97..103 CDD:409353
Ig strand F 110..118 CDD:409353
CDR3 119..123 CDD:409353
Ig strand G 123..132 CDD:409353
FR4 125..132 CDD:409353
Ig_3 136..205 CDD:404760
Ig strand A' 144..148 CDD:409353
Ig strand B 151..160 CDD:409353
Ig strand F 197..205 CDD:409353
Ig 223..307 CDD:416386
putative Ig strand A 223..229 CDD:409353
Ig strand B 239..243 CDD:409353
Ig strand C 252..256 CDD:409353
Ig strand E 278..282 CDD:409353
Ig strand F 292..297 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.