DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrapper and NCAM2

DIOPT Version :9

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:XP_011527877.1 Gene:NCAM2 / 4685 HGNCID:7657 Length:874 Species:Homo sapiens


Alignment Length:452 Identity:107/452 - (23%)
Similarity:198/452 - (43%) Gaps:74/452 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VVRCLLAALILGQVQA--ELDFNNDL-------ENSQKFKSIPTTVKTYENDTVQLPCTLNTPFR 63
            :.||      .|:|:|  |:||.:.:       ..|...||...|.:..|..|.....: .:|..
Human   208 IYRC------EGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRAS-GSPEP 265

  Fly    64 YVRWHRDDVALVDSRHPELPPPDRIMLWPNGSLQVANVQSSDTGDYYCEMNSDSGHVVQQHAIEV 128
            .:.|.|:...:.::.       ..|:...|..|.|.|:.:||.|.|.|...:.:|...:|..::|
Human   266 AISWFRNGKLIEENE-------KYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 323

  Fly   129 QLAPQVLIEPSDLTEQRIGAIFEVVCEAQGVPQPVITWR--------------LNGNVIQPQSNT 179
            .:.|.::...::.|.:. |.: .:||:|:|.|.|.|||:              |:|. |:.:...
Human   324 FVQPHIIQLKNETTYEN-GQV-TLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGR-IEVKGQH 385

  Fly   180 GNRQSLILEIKSRNQAGLIECVASNGVGEPAVANVYLHVLFSPEVSIPQPVVYTKLGSRAHLECI 244
            |:....|.::| .:.:|..:|.|::.:|... .::||.:.::|:....|.:.|:..|:..::.|.
Human   386 GSSSLHIKDVK-LSDSGRYDCEAASRIGGHQ-KSMYLDIEYAPKFISNQTIYYSWEGNPINISCD 448

  Fly   245 VEAAPAATVKWFHHGLPVALGAHSTTHESELQTNRSVDHYVNAVRHMLVVKSVRNADMGQYECRA 309
            |::.|.|::.|....|  .|.|.:||:.....|.|.:         :|.:....:.|.|:|.|.|
Human   449 VKSNPPASIHWRRDKL--VLPAKNTTNLKTYSTGRKM---------ILEIAPTSDNDFGRYNCTA 502

  Fly   310 SNQISVKSGSVELTGRPMPCL---FKINPGTQSSTSHVLVWQTESL--LPIMEFKLKFRQIPSNN 369
            :|.|..:.....|....:|..   .||...:| :|:.|...:.:|.  :||..:::..:::.| .
Human   503 TNHIGTRFQEYILALADVPSSPYGVKIIELSQ-TTAKVSFNKPDSHGGVPIHHYQVDVKEVAS-E 565

  Fly   370 VTRQVRTNWTELTIPAQATNGLIYITTYTLHGLQPASLYEVSVLARNSFGWSDNSKIVRFAT 431
            :.:.||::..:              |...|:.|:|.:.||:.|.|.|..|..|.|||..|.|
Human   566 IWKIVRSHGVQ--------------TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQT 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 Ig 41..124 CDD:299845 17/82 (21%)
IG_like 41..118 CDD:214653 16/76 (21%)
IG_like 145..218 CDD:214653 22/86 (26%)
Ig 147..219 CDD:299845 22/85 (26%)
I-set 224..323 CDD:254352 23/98 (23%)
IGc2 236..314 CDD:197706 20/77 (26%)
FN3 339..431 CDD:238020 23/93 (25%)
NCAM2XP_011527877.1 Ig1_NCAM-2 46..137 CDD:143274
I-set 47..136 CDD:254352
I-set 142..218 CDD:254352 4/15 (27%)
IGc2 153..214 CDD:197706 2/11 (18%)
Ig 233..326 CDD:299845 22/100 (22%)
I-set 240..323 CDD:254352 20/90 (22%)
Ig5_NCAM-2 325..422 CDD:143278 24/101 (24%)
IG_like 333..420 CDD:214653 21/91 (23%)
IG_like 438..515 CDD:214653 21/87 (24%)
IGc2 439..507 CDD:197706 20/78 (26%)
FN3 521..613 CDD:238020 27/107 (25%)
fn3 619..703 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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