DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrapper and NCAM1

DIOPT Version :9

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_001229536.1 Gene:NCAM1 / 4684 HGNCID:7656 Length:884 Species:Homo sapiens


Alignment Length:508 Identity:114/508 - (22%)
Similarity:198/508 - (38%) Gaps:125/508 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GQVQAELDFNNDLENSQKFKSIPTTVKTYEN---------DTVQLPCTL-NTPFRYVRWHRDDVA 73
            |::.|..:.|  .::.|...::|.|::..:|         .:|.|.|.. ..|...:.|.:|...
Human   191 GRILARGEIN--FKDIQVIVNVPPTIQARQNIVNATANLGQSVTLVCDAEGFPEPTMSWTKDGEQ 253

  Fly    74 LVDSRHPELPPPDRIMLWPNGS--LQVANVQSSDTGDYYCEMNSDSGHVVQQHAIEVQLAPQVLI 136
            :      |....|...::.:.|  |.:..|..:|..:|.|...:.:|.......::|...|::..
Human   254 I------EQEEDDEKYIFSDDSSQLTIKKVDKNDEAEYICIAENKAGEQDATIHLKVFAKPKITY 312

  Fly   137 EPS----DLTEQRIGAIFEVVCEAQGVPQPVITWRL-------------------------NGNV 172
            ..:    :|.||     ..:.|||.|.|.|.||||.                         |..|
Human   313 VENQTAMELEEQ-----VTLTCEASGDPIPSITWRTSTRNISSEEKASWTRPEKQEVHAPWNWQV 372

  Fly   173 IQPQSNTGNR---------------------QSLILEIKSRNQAGLIECVASNGVGEPAVANVYL 216
            .:.:...|:.                     .||.|:......||...|.|||.:|:.: .::||
Human   373 GRQKGQAGSAGFPGSHETLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDS-QSMYL 436

  Fly   217 HVLFSPEVSIPQPVVYTKLGSRAHLECIVEAAPAATVKWFHHG--LPVA----LGAHSTTHESEL 275
            .|.::|::..| ..|||..|::.::.|.|.|.|:||:.||..|  ||.:    :..::|...|.|
Human   437 EVQYAPKLQGP-VAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYL 500

  Fly   276 QTNRSVDHYVNAVRHMLVVKSVRNADMGQYECRASNQISVKSGS---VELTGRPMPCLFKINPGT 337
            :.....::                 |.|.|.|.|.|:|..:|..   |:......|.:.::.|  
Human   501 EVTPDSEN-----------------DFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDQVEP-- 546

  Fly   338 QSSTSHVLVWQTESL--LPIMEFKLKFRQIPSNNVTRQV-RTNWTELTIPAQATNGLIYITTYTL 399
            .|||:.|...:.|:.  :||:::|.::|.     |..:| .:.|.:  ....:..|::     |:
Human   547 YSSTAQVQFDEPEATGGVPILKYKAEWRA-----VGEEVWHSKWYD--AKEASMEGIV-----TI 599

  Fly   400 HGLQPASLYEVSVLARNSFGWSDNSKIVRFAT---GGEVELPNYSTESELQDD 449
            .||:|.:.|.|.:.|.|..|..:.|....|.|   .||...|  ..|.::.:|
Human   600 VGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQGEPSAP--KLEGQMGED 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 Ig 41..124 CDD:299845 18/94 (19%)
IG_like 41..118 CDD:214653 17/88 (19%)
IG_like 145..218 CDD:214653 25/118 (21%)
Ig 147..219 CDD:299845 25/117 (21%)
I-set 224..323 CDD:254352 28/107 (26%)
IGc2 236..314 CDD:197706 21/83 (25%)
FN3 339..431 CDD:238020 24/94 (26%)
NCAM1NP_001229536.1 Ig1_NCAM-1 20..115 CDD:143273
IG 124..190 CDD:214652
Ig 211..307 CDD:325142 19/101 (19%)
Ig 306..438 CDD:325142 29/137 (21%)
Ig_3 447..519 CDD:316449 24/89 (27%)
FN3 534..631 CDD:238020 26/110 (24%)
fn3 639..720 CDD:306538 3/14 (21%)
Trypan_PARP <792..>864 CDD:330686
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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