DRSC/TRiP Functional Genomics Resources

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Protein Alignment wrapper and CG13506

DIOPT Version :10

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_611666.2 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster


Alignment Length:536 Identity:120/536 - (22%)
Similarity:205/536 - (38%) Gaps:93/536 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RCLLAALILGQVQA-------------------ELDFNNDLENSQK-----------------FK 38
            |.||.:|::||:..                   |.::.:|.::...                 |.
  Fly     9 RLLLISLLIGQLYVSCAGSPIDADVKGTDYQDDEYEYGDDTDDDDTQIIDVTKNHAEQEAPPYFD 73

  Fly    39 SIPTTVKTYENDTVQLPCTLNTPFRY---VRWHRDDVALVDSRHPELPPPDRIMLWPNGSLQVAN 100
            .....|:....|.|.|.|.... |:.   |.|:::.:.:.:.::   |...|:....|.|:.:.|
  Fly    74 VTDLRVEAKPGDDVILNCDARN-FQLSNAVVWYKNRIIIANGQN---PISQRVQCMLNNSILLRN 134

  Fly   101 VQSSDTGDYYCEMNSDSGHVVQQH-AIEVQLAPQVLIEPSDLTEQ----RIGAIFEVVCEAQGVP 160
            |...|:.|||||:....   |:|| |:.|.....:|.:..|:|::    |.|...::.|......
  Fly   135 VSPEDSDDYYCEILPQR---VRQHTALRVGARLSILCDDRDITDRSQTFRQGDHHKLECRTYLPD 196

  Fly   161 QPVITWRLNGNVIQPQSNTGNRQSLILEIKSRNQAGLIECVASNGVGEPAVANVYLHVLFSPEVS 225
            ...|.|..|....||.|.......:||:......||..:|:|.:|...|....|::.|.:||.||
  Fly   197 NATIKWSFNDLNGQPSSVDNQNGVIILDNVDEKNAGDYQCLADDGSRHPPHGTVHIDVQYSPIVS 261

  Fly   226 IPQPVVYTKLGSRAHLECIVEAAPAATVKWFHHGLPVALGAHSTTHESELQTNRSVDHYVNAVRH 290
            ..:..|.|:.|:.|.|.|...|.|.....:...|..:.|     :.:..|:.:...||.    |.
  Fly   262 THRHNVNTEKGATAELYCNYRAKPIGRSYFIKDGKTLQL-----SDKYSLKDSVHNDHN----RT 317

  Fly   291 MLVVKSVRNADMGQYECRASNQISVKSGSVELTGRPMPCLFKINPGTQSSTSHVLVWQTESLLPI 355
            .|:|:.|.::|:|:|.|:..|.|......|.::..|....|:  ..|.......|.|...|...:
  Fly   318 TLIVREVTDSDLGEYLCQVENAIGSNEVKVHVSYNPETPQFE--DMTVEGNKVTLHWLVRSHQLL 380

  Fly   356 MEFKLKFRQIPSNNVTRQVRTNWTELTIPAQAT---NGLIYITTYTLHGLQ-PASLYEVSVLARN 416
            .|..|.:          |:..::|..|:....|   |....|...| |.|: ...::...|..:|
  Fly   381 SEAMLDY----------QLTGSYTWSTVQVLETHRHNNTDNIWKIT-HQLELSRGVWHARVKTKN 434

  Fly   417 SFGWSDNSKIVRFATGGEVELPNYSTESELQDDFTEEDFHNEITQRSEVLSASMMFNSGSVNG-- 479
            :.|||      .|:.....|:|.   :||:..|...|...:||.|     :..|..:.|:.:.  
  Fly   435 TKGWS------HFSNDHVFEIPE---DSEVDKDEEVELPPDEIVQ-----AGIMPMSKGAASSMQ 485

  Fly   480 RGGISAFIYSLCLINI 495
            |..:...:.:..|:.:
  Fly   486 RLNVGVILLAALLLRV 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 IG_like 41..118 CDD:214653 20/79 (25%)
Ig strand B 52..56 CDD:409353 2/3 (67%)
Ig strand C 64..68 CDD:409353 1/6 (17%)
Ig strand E 94..98 CDD:409353 1/3 (33%)
Ig strand F 108..113 CDD:409353 4/4 (100%)
Ig strand G 122..125 CDD:409353 2/3 (67%)
Ig 133..219 CDD:472250 21/89 (24%)
Ig strand B 150..154 CDD:409353 0/3 (0%)
Ig strand C 163..167 CDD:409353 1/3 (33%)
Ig strand E 183..187 CDD:409353 0/3 (0%)
Ig strand F 197..202 CDD:409353 1/4 (25%)
Ig strand G 211..214 CDD:409353 0/2 (0%)
Ig_3 222..311 CDD:464046 24/88 (27%)
FN3 339..431 CDD:238020 20/95 (21%)
CG13506NP_611666.2 Ig_3 69..146 CDD:464046 19/80 (24%)
Ig_3 173..238 CDD:464046 15/64 (23%)
Ig 258..349 CDD:472250 27/99 (27%)
Ig strand B 275..279 CDD:409353 2/3 (67%)
Ig strand C 288..292 CDD:409353 0/3 (0%)
Ig strand E 317..321 CDD:409353 1/3 (33%)
Ig strand F 331..336 CDD:409353 2/4 (50%)

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