DRSC/TRiP Functional Genomics Resources

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Protein Alignment wrapper and DIP-theta

DIOPT Version :10

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster


Alignment Length:540 Identity:117/540 - (21%)
Similarity:192/540 - (35%) Gaps:124/540 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LGQVQAELDFNNDLE-----NSQKFKSIPTTVKTYENDTVQ------LPCTLNTPFRY-VRWHR- 69
            |.::|.:.:...|:.     |:...|.:|...:..:|.||.      |.|.::....| :.|.| 
  Fly   102 LAEMQNKDELLEDIREDTVVNAIPEKDLPKFGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRV 166

  Fly    70 DDVALVDSRHPELPPPDRIML-------WPNGSLQVANVQSSDTGDYYCEMNSDS-----GHVVQ 122
            |...::..::..:....|:.:       |   .|::.:|:.||.|.|.|::|:|.     |:   
  Fly   167 DTQTILTIQNHVITKNHRMSITHAEKRAW---ILRIRDVKESDKGWYMCQINTDPMKSQVGY--- 225

  Fly   123 QHAIEVQLAPQVLIEPSDLTEQ--RIGAIFEVVCEAQGVPQPVITWRLNGNVIQPQSNTG----- 180
               ::|.:.|.:|..|:. |:.  |.|:...:.|.|.|.|.|.||||..|..:.|..|..     
  Fly   226 ---LDVVVPPDILDYPTS-TDMVIREGSNVTLKCAATGSPTPTITWRREGGELIPLPNGAEAVAY 286

  Fly   181 NRQSLILEIKSRNQAGLIECVASNGVGEPAVANVYLHVLFSPEVSIPQPVVYTKLGSRAHLECIV 245
            |...|.:...:|...|...|:||||:.......|.|.|.|.|.:.|...:|...|.....|||..
  Fly   287 NGSFLTIAKVNRLNMGAYLCIASNGIPPTVSKRVMLIVHFPPMIWIQNQLVGAALTQNITLECQS 351

  Fly   246 EAAPAATVKWFHHGLPVALGAH--STTHESELQTNRSVDHYVNAVRHMLVVKSVRNADMGQYECR 308
            ||.|.:...|..:...:..|..  ..|.||..:           :...|.:..|...|.|.|.|.
  Fly   352 EAYPKSINYWMKNDTIIVPGERFVPETFESGYK-----------ITMRLTIYEVDIQDFGAYRCV 405

  Fly   309 ASNQISVKSGSVELTGRPMPCLFKINPGTQSSTSHVLVWQTESLLPIMEFKLKFRQIPSNNVTRQ 373
            |.|.:....|:::|...|            .:|:...:..|.|:..:....:|:.:......::.
  Fly   406 AKNSLGDTDGAIKLYHIP------------QTTTMTTMAPTVSINTVPVVLVKYNKEQRYGSSQN 458

  Fly   374 VRTNWTELTIPAQATNGLIYITTYTLHG--------LQPASLYEVSVLARNSFGW---------- 420
            ..||      |.....|.....|....|        ..|:.|..|.|.|.:|. |          
  Fly   459 SNTN------PYNFNPGNSQQNTKLQRGKSNSKGSDQSPSGLNNVFVGATSSL-WNSQDHHSSSS 516

  Fly   421 --------------------------SDNSKIVRFATGGEVELPNYSTESELQDDFTE----EDF 455
                                      ||:....| :.|....|.|:..:| |.||...    :.:
  Fly   517 SSSSASSRGRDHHQQQHHQQQQQNHGSDHGASYR-SDGKSPHLTNHDAKS-LTDDLDRMQDLKGW 579

  Fly   456 HNEITQRSEVLSASMMFNSG 475
            .:.::..|.:|..||:...|
  Fly   580 ASRLSPISPILGLSMILGVG 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 IG_like 41..118 CDD:214653 21/96 (22%)
Ig strand B 52..56 CDD:409353 2/9 (22%)
Ig strand C 64..68 CDD:409353 1/4 (25%)
Ig strand E 94..98 CDD:409353 1/3 (33%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 122..125 CDD:409353 0/2 (0%)
Ig 133..219 CDD:472250 28/92 (30%)
Ig strand B 150..154 CDD:409353 0/3 (0%)
Ig strand C 163..167 CDD:409353 2/3 (67%)
Ig strand E 183..187 CDD:409353 1/3 (33%)
Ig strand F 197..202 CDD:409353 1/4 (25%)
Ig strand G 211..214 CDD:409353 0/2 (0%)
Ig_3 222..311 CDD:464046 22/90 (24%)
FN3 339..431 CDD:238020 20/135 (15%)
DIP-thetaNP_723103.1 IG_like 137..230 CDD:214653 22/101 (22%)
Ig strand B 147..151 CDD:409353 1/3 (33%)
Ig strand C 160..164 CDD:409353 0/3 (0%)
Ig strand E 195..199 CDD:409353 2/6 (33%)
Ig strand F 209..214 CDD:409353 2/4 (50%)
Ig strand G 221..224 CDD:409353 0/2 (0%)
Ig 232..324 CDD:472250 29/92 (32%)
Ig strand B 251..255 CDD:409275 0/3 (0%)
Ig strand C 264..268 CDD:409275 2/3 (67%)
Ig strand E 289..293 CDD:409275 1/3 (33%)
Ig strand F 303..308 CDD:409275 1/4 (25%)
Ig strand G 317..320 CDD:409275 0/2 (0%)
Ig_3 327..408 CDD:464046 22/91 (24%)

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