DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrapper and DIP-beta

DIOPT Version :9

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster


Alignment Length:382 Identity:98/382 - (25%)
Similarity:163/382 - (42%) Gaps:60/382 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLAALILGQVQAELDFNNDLENSQKFKSI----PTTVKTYENDTV------QLPCTLN------- 59
            ||..|:||..       .||..|.|..|:    |..|...||.|:      ...|.:|       
  Fly    72 LLLLLLLGNC-------IDLTVSNKISSVGAFEPDFVIPLENVTIAQGRDATFTCVVNNLGGHRV 129

  Fly    60 ------TPFRYVRWHRDDVALVDSRHPE-LPPPDRIMLWPNG----SLQVANVQSSDTGDYYCEM 113
                  .|.: |.|.:.|...:.:.|.. :...||:.:..|.    :|.:..|:..|.|.|.|::
  Fly   130 SGDGSSAPAK-VAWIKADAKAILAIHEHVITNNDRLSVQHNDYNTWTLNIRGVKMEDAGKYMCQV 193

  Fly   114 NSDSGHVVQQHAIEVQLAPQVLIEPS--DLTEQRIGAIFEVVCEAQGVPQPVITWR--------- 167
            |:|. ..:|...:||.:.|.::.|.:  |:.... |...::||.|:|.|:|.||||         
  Fly   194 NTDP-MKMQTATLEVVIPPDIINEETSGDMMVPE-GGSAKLVCRARGHPKPKITWRREDGREIIA 256

  Fly   168 LNGNVIQPQSNTGNRQSLILEIKSRNQAGLIECVASNGVGEPAVANVYLHVLFSPEVSIPQPVVY 232
            .||:..:.::.:...:.|.|...:|::.|...|:|||||.......:.|.|.|.|.|.:|..:|.
  Fly   257 RNGSHQKTKAQSVEGEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVG 321

  Fly   233 TKLGSRAHLECIVEAAPAATVKW-FHHGLPVALGAHSTTHESELQTNRSVDHYVNAVRHMLVVKS 296
            ..:.:...|.|.|||:|.|...| ..:|..:..|......|.|        :.:.|:..:|.:|.
  Fly   322 APVLTDVTLICNVEASPKAINYWQRENGEMIIAGDRYALTEKE--------NNMYAIEMILHIKR 378

  Fly   297 VRNADMGQYECRASNQISVKSGSVEL--TGRPMPCLFKINPGTQSSTSHVLVWQTES 351
            ::::|.|.|:|.:.|.|....|::.|  ..||...:.:.:...:.|.:.|:...|.|
  Fly   379 LQSSDFGGYKCISKNSIGDTEGTIRLYEMERPGKKILRDDDLNEVSKNEVVQKDTRS 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 Ig 41..124 CDD:299845 24/106 (23%)
IG_like 41..118 CDD:214653 23/100 (23%)
IG_like 145..218 CDD:214653 24/81 (30%)
Ig 147..219 CDD:299845 24/80 (30%)
I-set 224..323 CDD:254352 26/101 (26%)
IGc2 236..314 CDD:197706 20/78 (26%)
FN3 339..431 CDD:238020 4/13 (31%)
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 26/112 (23%)
ig 102..195 CDD:278476 19/93 (20%)
IG_like 219..307 CDD:214653 25/88 (28%)
Ig 221..307 CDD:299845 25/86 (29%)
Ig 311..404 CDD:299845 26/100 (26%)
IG_like 327..405 CDD:214653 22/85 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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