DRSC/TRiP Functional Genomics Resources

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Protein Alignment wrapper and DIP-kappa

DIOPT Version :10

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster


Alignment Length:515 Identity:121/515 - (23%)
Similarity:195/515 - (37%) Gaps:101/515 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ENSQKFKSIPTTVKTYENDTVQ------LPCTLNTPFRY-VRWHR-DDVALVDSRHPELPPPDRI 88
            :.:|:....|...:...|.||.      :.|.:.....| |.|.| |...::...|..:....||
  Fly    65 QTAQEDSDFPRFAEPIANVTVSVGRDALMACVVENLKGYKVAWVRVDTQTILSIHHNVISQNSRI 129

  Fly    89 MLWPNGS----LQVANVQSSDTGDYYCEMNSD-----SGHVVQQHAIEVQLAPQVLIEPSDLTEQ 144
            .|..|..    |.:..|:.:|.|.|.|::|:|     .|:      ::| :.|.:::|  .||..
  Fly   130 SLTYNDHRSWYLHIKEVEETDRGWYMCQVNTDPMRSRKGY------LQV-VVPPIIVE--GLTSN 185

  Fly   145 ----RIGAIFEVVCEAQGVPQPVITWR--------LNGNVIQPQSNTGNRQSLILEIKSRNQAGL 197
                |.|....:||:|:|.|:|.:.||        :.|..:    |..:.:.|.:...||.....
  Fly   186 DMVVREGQNISLVCKARGYPEPYVMWRREDGEEMLIGGEHV----NVVDGELLHITKVSRLHMAA 246

  Fly   198 IECVASNGVGEPAVANVYLHVLFSPEVSIPQPVVYTKLGSRAHLECIVEAAPAATVKWFHHGLPV 262
            ..|||||||.......|:|.|.|.|.:|||..:....||....|||..||.||:...|       
  Fly   247 YLCVASNGVPPSISKRVHLRVQFPPMLSIPNQLEGAYLGQDVILECHTEAYPASINYW------- 304

  Fly   263 ALGAHSTTHESEL---QTNRSVDHYVNA------VRHM-LVVKSVRNADMGQYECRASNQISVKS 317
                  ||...::   .|:|:.|.|...      .::| |.:::|...|.|.|.|.|.|.:....
  Fly   305 ------TTERGDMIISDTSRAGDKYETTSTVSGYTKYMKLKIRAVGPNDFGTYRCVAKNSLGETD 363

  Fly   318 GSVELTGRPMPC------LFKINPGTQSSTSHVLVWQTESLLP---IMEFKLKFRQIPSNNVTRQ 373
            |:::|...|.|.      :..:|........|...:.:.:.||   :.|::   .....||....
  Fly   364 GNIKLDEMPTPTTAIISEMSLLNRSYDGKRRHRNKFDSANALPDYGVEEWR---DGAQGNNAGNN 425

  Fly   374 VRTNWTELTIPAQATNG--------------LIYITTYTLHGLQPASLYEVSVLARNSFGWSDNS 424
            ...|.|.:..|..|.:.              ::.|.|.:. |:.......:.:.|..||.|....
  Fly   426 GDNNQTPVRNPPGAFHNSAGSLAQHNLLAKIMLGIKTQSF-GIFKRLSSSLPLAAGQSFLWLSTL 489

  Fly   425 KIV----RFATGGEVELPNYSTESELQDDFTEEDFHNEITQRSEVLSASMMFNSGSVNGR 480
            .:|    |:........|| |.|:.:.:|...|.:..    ||..:|.|...|:..:..|
  Fly   490 SLVSAPSRWRMSNVENRPN-SPETVVNNDTAAECWET----RSHCVSESNNNNNSRITQR 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 IG_like 41..118 CDD:214653 23/93 (25%)
Ig strand B 52..56 CDD:409353 1/9 (11%)
Ig strand C 64..68 CDD:409353 2/4 (50%)
Ig strand E 94..98 CDD:409353 1/7 (14%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 122..125 CDD:409353 0/2 (0%)
Ig 133..219 CDD:472250 27/97 (28%)
Ig strand B 150..154 CDD:409353 0/3 (0%)
Ig strand C 163..167 CDD:409353 0/3 (0%)
Ig strand E 183..187 CDD:409353 1/3 (33%)
Ig strand F 197..202 CDD:409353 1/4 (25%)
Ig strand G 211..214 CDD:409353 0/2 (0%)
Ig_3 222..311 CDD:464046 28/98 (29%)
FN3 339..431 CDD:238020 19/112 (17%)
DIP-kappaNP_723828.1 IG_like 82..174 CDD:214653 24/98 (24%)
Ig strand B 91..95 CDD:409353 0/3 (0%)
Ig strand C 104..108 CDD:409353 1/3 (33%)
Ig strand E 139..143 CDD:409353 1/3 (33%)
Ig strand F 153..158 CDD:409353 2/4 (50%)
Ig strand G 165..168 CDD:409353 0/2 (0%)
Ig 176..267 CDD:472250 27/96 (28%)
Ig strand B 195..199 CDD:409301 0/3 (0%)
Ig strand C 208..212 CDD:409301 0/3 (0%)
Ig strand E 232..236 CDD:409301 1/3 (33%)
Ig strand F 246..251 CDD:409301 1/4 (25%)
Ig strand G 260..263 CDD:409301 0/2 (0%)
IG_like 282..368 CDD:214653 26/98 (27%)
Ig strand B 288..292 CDD:409353 1/3 (33%)
Ig strand C 301..305 CDD:409353 1/16 (6%)
Ig strand E 330..340 CDD:409353 2/9 (22%)
Ig strand F 350..355 CDD:409353 2/4 (50%)
Ig strand G 363..366 CDD:409353 1/2 (50%)

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