DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrapper and DIP-lambda

DIOPT Version :9

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster


Alignment Length:542 Identity:121/542 - (22%)
Similarity:195/542 - (35%) Gaps:136/542 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CSVVRCLLAALILGQVQAELDFNNDLENSQKFKSIPTTVKTYENDTVQL------PCTLNTPFRY 64
            ||:...|:.|:.:.:..|....:...|:.:   ..|..:....|.||.:      .|.::....|
  Fly    18 CSIAFILIKAITITKCHAVAHIHGKGESEE---IDPQFLAKLSNTTVPIGRDISFTCVVDNLGHY 79

  Fly    65 -VRWHRDDVALVDSRHP---ELPPPDRIMLWPNG----SLQVANVQSSDTGDYYCEMNSD----- 116
             |.|.:.|...:...|.   .|.|  |:.:..||    .|.::.||.:|:|.|.|::|:|     
  Fly    80 RVAWIKSDSKAILGIHTHMVSLNP--RLSVTHNGHNTWKLHISRVQINDSGSYMCQVNTDPMKSL 142

  Fly   117 SGHVVQQHAIEVQLAPQVLIEPSDLTEQRI---GAIFEVVCEAQGVPQPVITWRLN-GNVI---- 173
            ||:      ::|.:.|.:|..|....|..:   |....::|...|||:|.:.||.. |..|    
  Fly   143 SGY------LDVVVPPDILNHPEHNPEDGVCQEGGSISLMCSVTGVPRPKVLWRREAGKEIILRT 201

  Fly   174 QPQSNTGNR----QSLILEIKSRNQAGLIECVASNGVGEPAVA---NVYLHVLFSPEVSIPQPVV 231
            ..:..||.:    :.|:|....|:..|...|:||||: .|:|:   |||::  |||.|.....:|
  Fly   202 DGRDKTGFKSVEGERLVLTNVQRSDMGGYNCIASNGI-PPSVSKRFNVYVN--FSPTVKAISQLV 263

  Fly   232 YTKLGSRAHLECIVEAAPAATVKWFHHGLPVALGAHSTTHESELQTNRSVDHYVNAVRHMLVVKS 296
            ...:.....||||||..|.....|:.....:.|...:..:.||...|....|....:||:     
  Fly   264 GAPVEREVTLECIVEVFPKPLNGWYRSEGNIKLHNGNKYNISEEVINIYTWHLNLTIRHL----- 323

  Fly   297 VRNADMGQYECRASNQISVKSGSVELTGRPMPCLFKINPGTQSST----------SHVLVWQTES 351
             ..:|.|.|.|.:.|.:......:.|....:|......|.....|          ||     .:.
  Fly   324 -TKSDFGTYSCSSVNALGKSESLIRLQELRLPPKLTTTPTPHMQTTGKSRRKHPASH-----KKG 382

  Fly   352 LLPIMEFK---------------------LKFRQIPSNNVT-----------------------R 372
            |..::.|:                     |||....::|:.                       .
  Fly   383 LNEVLRFQETHFANQIQQENEDHNEGFDLLKFTNSENSNIVLESGHINSMINKEDVNIYHPKQYG 447

  Fly   373 QVRTNWTELTIPAQATNGLIYITTYTLHGLQPASLYEVSVLAR------------NSFGW----- 420
            |.:||....|||:..|..::     |..|.|..:|...:.:|.            :|..|     
  Fly   448 QEKTNKPSGTIPSTRTPWIL-----TNAGSQRPALTSYATVALITSFWLFFWRVFHSLDWDAIRV 507

  Fly   421 -SDNSKIVRFATGGEVELPNYS 441
             |....:|.|......|.|||:
  Fly   508 SSVVHHVVVFKRRSYFEAPNYA 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 Ig 41..124 CDD:299845 26/101 (26%)
IG_like 41..118 CDD:214653 24/95 (25%)
IG_like 145..218 CDD:214653 26/87 (30%)
Ig 147..219 CDD:299845 26/83 (31%)
I-set 224..323 CDD:254352 22/98 (22%)
IGc2 236..314 CDD:197706 20/77 (26%)
FN3 339..431 CDD:238020 26/163 (16%)
DIP-lambdaNP_001334747.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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