DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrapper and Kirrel

DIOPT Version :9

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:XP_011238330.1 Gene:Kirrel / 170643 MGIID:1891396 Length:805 Species:Mus musculus


Alignment Length:569 Identity:114/569 - (20%)
Similarity:178/569 - (31%) Gaps:225/569 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PHMCSVVRCLL---AALILGQVQAELDFNNDLENSQKFKSIPTTVKTYENDTVQLPCTLNTPFRY 64
            ||:  ||..|:   .||.|...|.            :|...|............|||.|......
Mouse    32 PHL--VVAYLIFVTLALALPGTQT------------RFSQEPADQTVVAGQRAVLPCVLLNYSGI 82

  Fly    65 VRWHRDDVALVDSRHPELPPPDRIMLWPN----GS-------LQVANVQSSDTGDYYC------- 111
            |:|.:|.:||...:        .:..||.    ||       |::.:.:.||...|.|       
Mouse    83 VQWTKDGLALGMGQ--------GLKAWPRYRVVGSADAGQYNLEITDAELSDDASYECQATEAAL 139

  Fly   112 --------------EMNSDSGHVV-------------------------------QQHAI----- 126
                          |...|.|.|:                               |:.|:     
Mouse   140 RSRRAKLTVLIPPEETRIDGGPVILLQAGTPYNLTCRAFNAKPAATIIWFRDGTQQEGAVTSTEL 204

  Fly   127 ------EVQLAPQVLIEPSDLTEQRIGAIFEVVCEAQGVPQ-------------PVITWRLNGNV 172
                  |..:: |:||||:||.   ||.:|......:.:|.             |.:|..     
Mouse   205 LKDGKRETTIS-QLLIEPTDLD---IGRVFTCRSMNEAIPNGKETSIELDVHHPPTVTLS----- 260

  Fly   173 IQPQS------------NTGNRQSL---------ILE--IKSRNQAGL--------IECVASNGV 206
            |:||:            .|.|.:.|         ::|  .:||.:..:        :.|...|.|
Mouse   261 IEPQTVLEGERVIFTCQATANPEILGYRWAKGGFLIEDAHESRYETNVDYSFFTEPVSCEVYNKV 325

  Fly   207 GEPAVANVYLHVLFSPEVSI-PQPVVYTKLGSRAHLECIVEAAPAATVKWFHHGLPVALGAHSTT 270
            |...|:.: ::|.|:|.:.: |:|.. |.:||...|.|:....|..|:.|             |.
Mouse   326 GSTNVSTL-VNVHFAPRIVVYPKPTT-TDIGSDVTLTCVWVGNPPLTLTW-------------TK 375

  Fly   271 HESEL---------QTNRSVDHYVNAVRHMLVVKSVRNADMGQYECRA-SNQISVKSGSVEL--- 322
            .:|.:         :.|.|.....|:  :.|::|||..||.|.|.||| ..:|.|....|.|   
Mouse   376 KDSNMGPRLPGSPPEANLSAQVLSNS--NQLLLKSVTQADAGTYTCRAIVPRIGVAEREVPLYVN 438

  Fly   323 ----------------TGRPMPCLFKINPGTQSSTSHVLVWQTESLLPIMEFKLKFRQIPSNNVT 371
                            .|..:.|.....|....     :.|         .:|..|.::.:....
Mouse   439 GPPIISSEAVQFAVRGDGGKVECFIGSTPPPDR-----IAW---------AWKENFLEVGTLERY 489

  Fly   372 RQVRTNWTELTIPAQATNGLIYITTYTLHGLQPASLY-EVSVLARNSFG 419
            ...|||           :|...::|.|::.:..|... ..:..|.||||
Mouse   490 TVERTN-----------SGSGVLSTLTINNVMEADFQTHYNCTAWNSFG 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 Ig 41..124 CDD:299845 24/145 (17%)
IG_like 41..118 CDD:214653 21/108 (19%)
IG_like 145..218 CDD:214653 20/116 (17%)
Ig 147..219 CDD:299845 19/115 (17%)
I-set 224..323 CDD:254352 30/128 (23%)
IGc2 236..314 CDD:197706 23/87 (26%)
FN3 339..431 CDD:238020 15/82 (18%)
KirrelXP_011238330.1 Ig 54..148 CDD:386229 20/101 (20%)
Ig2_KIRREL3-like 170..251 CDD:143236 14/84 (17%)
Ig 255..336 CDD:386229 16/86 (19%)
Ig_3 340..421 CDD:372822 25/96 (26%)
Ig5_KIRREL3 439..536 CDD:143306 18/114 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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