DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wrapper and LOC1273932

DIOPT Version :10

Sequence 1:NP_477404.1 Gene:wrapper / 37555 FlyBaseID:FBgn0025878 Length:500 Species:Drosophila melanogaster
Sequence 2:XP_312987.6 Gene:LOC1273932 / 1273932 VectorBaseID:AGAMI1_015034 Length:371 Species:Anopheles gambiae


Alignment Length:380 Identity:99/380 - (26%)
Similarity:161/380 - (42%) Gaps:64/380 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LILGQVQAELDFNNDLENSQKFKSI----PTTVKTYENDTVQLPCTLNTPFRY-VRWHRDD---- 71
            ||:..:...|..:|..:.|....||    |..:|.. .:.|.|.|::.....| |.|.:.:    
Mosquito    10 LIITLLSVALTLSNAQQASTASPSIVFISPEQIKDI-GEQVTLNCSIANVKNYIVGWQKSNRDRT 73

  Fly    72 -----------VALVDSRHPELPPPDRIML-------WPNGSLQVANVQSSDTGDYYCEMNSDSG 118
                       :|:.:         ||..|       ..|..|::.::.::|.|.|.|::..:|.
Mosquito    74 KESNIISLGVQLAVTE---------DRFRLNFTKENNAANYVLEIHDIVNTDAGLYECQIQVNST 129

  Fly   119 HVVQQHAIEVQLA-PQVLIE---PSDLTEQRIGAIFEVVCEAQGVPQPVITWRLNGNVIQP---Q 176
            ..:.: .:|:|:. |.:|:|   .:.||:.. |...::||.|:|.|:|.|:||...|.|.|   |
Mosquito   130 SKITK-TVELQVRHPPMLLENQHTNTLTKAE-GEDAQLVCRAEGYPRPTISWRREYNAILPIGGQ 192

  Fly   177 SNTGNRQSLILEIKSRNQAGLIECVASNGVGEPAVANVYLHVLFSPEVSIPQPVVYTKLGSRAHL 241
            :.|||  .|.|....|...|...|.|.||||......:.|.|.|:|.:.:|:|.|...|.....:
Mosquito   193 TYTGN--ELRLNGLRREDRGTYYCTADNGVGRADTKTITLEVEFAPVIRVPRPKVAQALDYDIDV 255

  Fly   242 ECIVEAAPAATVKWFHHGLPVALGAHSTTHESELQTNRSVDHYVNAVRHMLVVKSVRNADMGQYE 306
            ||:|:|.||..:.|:..|..:    |:....|..|.....|...:.|:    :.||.....|.|.
Mosquito   256 ECVVQAFPAPAISWYRDGKQI----HNGGSYSISQIGSPDDVTTSVVK----IHSVAAEHYGDYV 312

  Fly   307 CRASNQISVKSGSVELTGRPMP-----CLFKINPGTQSS---TSHVLVWQTESLL 353
            |:|:|::......:.|..:.:|     .|...|.||.:.   ..|:|:..|..||
Mosquito   313 CKATNKVGQAEARLNLFEQNVPNINYSGLKWTNDGTSTRKVVLGHMLIVVTTLLL 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wrapperNP_477404.1 IG_like 41..118 CDD:214653 18/99 (18%)
Ig strand B 52..56 CDD:409353 2/3 (67%)
Ig strand C 64..68 CDD:409353 2/4 (50%)
Ig strand E 94..98 CDD:409353 1/3 (33%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 122..125 CDD:409353 0/2 (0%)
Ig 133..219 CDD:472250 32/91 (35%)
Ig strand B 150..154 CDD:409353 0/3 (0%)
Ig strand C 163..167 CDD:409353 1/3 (33%)
Ig strand E 183..187 CDD:409353 1/3 (33%)
Ig strand F 197..202 CDD:409353 1/4 (25%)
Ig strand G 211..214 CDD:409353 0/2 (0%)
Ig_3 222..311 CDD:464046 24/88 (27%)
FN3 339..431 CDD:238020 5/18 (28%)
LOC1273932XP_312987.6 None

Return to query results.
Submit another query.